DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019233
GeneSlc9a1
Synonymsantiporter
Apnh
Nhe1
Desc.solute carrier family 9 (sodium/hydrogen exchanger), member 1
LocusNM_016981 chr4:132925687-132979613(+)
DB links


Entrez 20544
MGI 102462
Ensembl ENSMUSG00000028854
Vega OTTMUSG00000011153
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019788
(v2.0)
Slc9a1NM_016981,NR_03958220544
165.73119.601830.642611.73625.939859.205822.9355925.352123.31075.02583
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019233
(v1.0)
Slc9a120544
Maternal RNA0.88707
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019788
(v2.0)
Slc9a120544
625/479-0.1287396/479-0.3898112/4791.4813346/4790.8586118/4790.0362606/479-0.2595
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019788
(v2.0)
Slc9a120544
328/232-0.0132167/232-0.5873103/2322.37293/2321.657452/232-0.0979241/232-0.5416
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019788
(v2.0)
Slc9a120544
72.282313752.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019788
(v2.0)
Slc9a120544
21.04138425.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
20.391712.44128.718154.099142.0406
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
592.511200.433135.10785.858387.7806
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
21.32143.8683713.5737
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
20.811812.316318.8125
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
36.647245.018
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
21.33383.8153920.6329
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
8.071653.957882.69515
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
91.5419107.63
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019233
(v1.0)
Slc9a1NM_01698120544
28.47747.03193
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019233
(v1.0)
Slc9a1NM_01698120544
24.513321.3461
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019233
(v1.0)
12296H3140A02-3Mm.4312Slc9a120544
U004916NAP006576-001Slc9a1;TC876204,TC859496Q61165U,F4.23424.08393.6233.81833.53233.49083.5536
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019233
(v1.0)
A_52_P466081Slc9a1NM_01698120544
11P2.2620.0775P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019233
(v1.0)
Slc9a120544
100100