DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019296
GeneSmad2
SynonymsMadh2
Madr2
Smad 2
Desc.SMAD family member 2
LocusNM_010754 chr18:76401355-76471401(+)
NM_001252481 chr18:76420775-76471401(+)
DB links


Entrez 17126
MGI 108051
Ensembl ENSMUSG00000024563
Vega OTTMUSG00000036536
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019854
(v2.0)
Smad2NM_001252481,NM_01075417126
4.2814819.2725.32495.982867.910035.0761514.818620.64597.554644.4372
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019296
(v1.0)
Smad217126
Maternal RNA0.94387
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019854
(v2.0)
Smad217126
672/3520.419477/3520.3214101/3521.7652221/3520.65637/352-1.1707235/352-1.1771
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019854
(v2.0)
Smad217126
364/1251.0233229/1250.752589/1252.9935182/1251.852413/125-1.147984/125-1.1585
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019854
(v2.0)
Smad217126
46.59412537.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019854
(v2.0)
Smad217126
13.40558515.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019296
(v1.0)
Smad2NM_01075417126
67.148257.701313.978817.203223.7244
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019296
(v1.0)
Smad2NM_01075417126
179.676108.34526.0334.133469.6418
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
70.20964.7382762.9534
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
68.531557.121949.4924
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
503.203935.765
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
70.25044.6733754.2816
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
12.942216.610417.1799
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
130.119164.875
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019296
(v1.0)
Smad2NM_01075417126
57.16097.88912
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019296
(v1.0)
Smad2NM_01075417126
4.1706216.3967
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019296
(v1.0)
1420634_a_atMm.391091Smad2NM_010754.417126
499.575469.2283.575234.6163.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019296
(v1.0)
A_52_P397280Smad2NM_01075417126
11P0.4330.0807P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019296
(v1.0)
Smad217126
011011