DBTMEE:0019313
| Gene | Smarcb1 |
| Synonyms | Baf47
Ini1
integrase interactor 1
Snf5
SNF5/INI1 |
| Description | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
| Locus | NM_011418 UCSC: chr10:75359514-75384359(-) OLP: chr10:75359514-75384359(-)
NM_001161853 UCSC: chr10:75359514-75384359(-) OLP: chr10:75359514-75384359(-)
|
| DB links |
Entrez 20587
MGI 1328366
Ensembl ENSMUSG00000000902
Vega OTTMUSG00000031849
|
| Feature | protein-coding |
| GO_BP |
-
 15 Terms
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
8 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2019871 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 43.525 | 17.0964 | 18.781 | 15.9351 | 8.37014 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 45.5094 | 9.12261 | 18.6526 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 44.4217 | 16.9248 | 24.4287 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 45.5358 | 8.99767 | 26.7925 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 17.3883 | 15.386 | 12.2532 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 22.4809 | 17.4418 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0019313
(v1.0) | Smarcb1 | NM_001161853,NM_011418 | 20587
| 23.3954 | 18.9964 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0019313
(v1.0) | 3073 | C0508B07-3 | Mm.26116 | Smarcb1 | 20587
| U031936 | NAP122069-001 | Smarcb1; | TC886621,TC886620,TC827212 | Q9ESU0 | | 3.6716 | 3.9042 | 3.5156 | 3.8776 | 3.4796 | 3.772 | 3.7306 |
0019313
(v1.0) | 11632 | H3120A03-5 | | Smarcb1 | 20587
| U031936 | NAP095646-001 | Smarcb1; | TC886622,TC886620 | Q9ESU0 | | 2.7571 | 2.9019 | 2.7543 | 2.6997 | 2.7814 | 2.8306 | 2.9124 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0019313
(v1.0) | 1416045_a_at | Mm.279751 | Smarcb1 | NM_011418.2,NM_001161853.1 | 20587
| 353.85 | 245.15 | 177.55 | 217.5 | 269.575 |
0019313
(v1.0) | 1435856_x_at | Mm.279751 | Smarcb1 | NM_011418.2,NM_001161853.1 | 20587
| 115.525 | 88.35 | 68.35 | 0 | 96.55 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0019313
(v1.0) | A_51_P284898 | Smarcb1 | NM_011418 | 20587
| 1 | 1 | P | 1.557 | 0.141 | P |
|
| Proteome |
N/A |
