DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019334
GeneSmg1
Synonyms
Desc.SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
LocusNM_001031814 chr7:125274826-125387151(-)
DB links


Entrez 233789
MGI 1919742
Ensembl ENSMUSG00000030655
Vega OTTMUSG00000042422
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019896
(v2.0)
Smg1NM_001031814233789
8.6481319.117734.126748.699556.325411.398424.562531.411754.92178.15318
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019334
(v1.0)
Smg1233789
Major ZGA0.92009
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019896
(v2.0)
Smg1233789
845/4270.471651/4270.49121221/4275.07764049/4274.568430/427-1.7401321/427-1.0076
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019896
(v2.0)
Smg1233789
456/1770.8488339/1770.8178888/1775.83382443/1775.09833/177-3.443496/177-1.4675
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019896
(v2.0)
Smg1233789
53.108315434.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019896
(v2.0)
Smg1233789
11.553411010.5
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
19.869823.570936.242539.033117.1917
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
562.208625.3311073.361172.81435.708
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
20.77573.1627125.7163
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
20.279123.334223.2196
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
1065.53818.621
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
20.78773.1193925.4665
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
33.554937.68837.9899
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
1441.281505.67
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019334
(v1.0)
Smg1NM_001031814233789
18.286118.5644
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019334
(v1.0)
Smg1NM_001031814233789
1.909792.98787
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019334
(v1.0)
1909C0268F07-3Mm.35795LOC233789233789
U029168NAP120788-0012610207I05Rik;TC799953U,F,22.26842.36292.27522.33912.37012.1782.5179
0019334
(v1.0)
4283C0926G07-3Mm.35795LOC233789233789
U029168NAP120788-0012610207I05Rik;TC799953U,F,23.26513.15222.81963.46313.08163.08993.2269
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019334
(v1.0)
1428539_atMm.309053Smg1NM_001031814.1233789
253.925470.725265.85786.975742.575
0019334
(v1.0)
1455657_atMm.309053Smg1NM_001031814.1233789
000637.95444.475
0019334
(v1.0)
1457262_atMm.309053Smg1NM_001031814.1233789
000233.3750
Agilent44K N/A
Proteome N/A