DBTMEE:0019361
| Gene | Smpd4 |
| Synonyms | neutral membrane (neutral sphingomyelinase-3) |
| Description | sphingomyelin phosphodiesterase 4 |
| Locus | NM_001164609 UCSC: chr16:17619447-17644923(+) OLP: chr16:17619447-17644923(+)
NM_001164610 UCSC: chr16:17619447-17644923(+) OLP: chr16:17619447-17644923(+)
NM_029945 UCSC: chr16:17619447-17644923(+) OLP: chr16:17619447-17644923(+)
NM_001164611 UCSC: chr16:17619447-17644923(+) OLP: chr16:17619447-17644923(+)
|
| DB links |
Entrez 77626
MGI 1924876
Ensembl ENSMUSG00000005899
Vega OTTMUSG00000035764
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
5 Terms
|
| KEGG |
-
2 Terms
|
| Ver2_FPKM |
see DBTMEE:2019937 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 16.7215 | 7.32692 | 28.4817 | 28.4447 | 6.67313 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 17.4839 | 3.6598 | 7.99383 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 17.066 | 7.25336 | 6.91923 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 17.494 | 3.60968 | 7.58877 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 26.3696 | 27.4645 | 21.6634 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 3.89902 | 8.17286 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0019361
(v1.0) | Smpd4 | NM_001164609,NM_001164610,NM_001164611,NM_029945 | 77626
| 1.13577 | 0.436384 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0019361
(v1.0) | 2176 | C0298G08-3 | Mm.34659 | 4122402O22Rik | 77626
| U016876 | NAP001751-001 | 4122402O22Rik; | TC809826 | P97351 | U,F,2 | 2.9273 | 2.8546 | 2.858 | 3.1441 | 3.0341 | 2.9877 | 2.9256 |
0019361
(v1.0) | 19362 | L0267A04-3 | | 4122402O22Rik | 77626
| U016876 | NAP001751-001 | 4122402O22Rik; | TC809826 | P97351 | U,F,2 | 3.0203 | 2.9091 | 3.3836 | 3.9184 | 3.4399 | 3.6574 | 3.5472 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0019361
(v1.0) | 1437024_at | Mm.34659 | Smpd4 | NM_029945.3,NM_001164609.1,NM_001164610.1,NM_001164611.1 | 77626
| 0 | 0 | 68.4 | 51.475 | 25.175 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0019361
(v1.0) | A_51_P159814 | 4122402O22Rik | NM_029945 | 77626
| 1 | 1 | P | 0.356 | 0.0658 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0019361
(v1.0) | Smpd4 | 77626
| 0 | 0 | 1 | 0 | 0 | 1 |
|
