DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019384
GeneSnap23
SynonymsSNAP-23
Sndt
Syndet
Desc.synaptosomal-associated protein 23
LocusNM_001177792 chr2:120393407-120426458(+)
NM_009222 chr2:120393407-120426458(+)
NM_001177793 chr2:120393407-120426458(+)
DB links


Entrez 20619
MGI 109356
Ensembl ENSMUSG00000027287
Vega OTTMUSG00000015619
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      SNARE interactions in vesicular transport (mmu04130)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019960
(v2.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
20.927214.920927.780250.194245.131220.01548.1707723.416531.183216.6702
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019384
(v1.0)
Snap2320619
Major ZGA0.95144
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019960
(v2.0)
Snap2320619
668/3440.4435400/3440.1011295/3443.33421060/3442.945718/344-2.1379125/344-2.0466
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019960
(v2.0)
Snap2320619
309/1540.4892177/1540.0841125/1543.2021492/1542.98669/154-1.925660/154-1.9326
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019960
(v2.0)
Snap2320619
34.319913924.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019960
(v2.0)
Snap2320619
11.28527016.12
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
15.498619.074837.316231.28015.63996
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
29.437639.650579.231974.754910.6799
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
16.20527.6532920.811
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
15.817918.883317.2856
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
168.845215.118
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
16.21467.5484718.9583
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
34.54930.202221.5185
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
64.984556.2766
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
27.826125.84
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019384
(v1.0)
Snap23NM_001177792,NM_001177793,NM_00922220619
9.6474220.0227
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019384
(v1.0)
4613C0944D08-3Mm.30197Snap2320619
U042350NAP036129-1Snap23;TC809873O09044U,F,23.25633.13813.09163.10153.81093.40193.7567
0019384
(v1.0)
9607H3083H12-3Mm.30197Snap2320619
U042350NAP095806-001Snap23;TC905908,TC905907,TC809873O09044U,F,23.55753.38223.28073.5992.8182.9792.9284
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019384
(v1.0)
1420896_atMm.245715Snap23NM_001177792.1,NM_009222.3,NM_001177793.120619
112.55179183.35179.9588.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019384
(v1.0)
A_51_P485383Snap23NM_00922220619
11P1.2430.352P
0019384
(v1.0)
A_52_P155778Snap23NM_00922220619
11P0.630.136P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019384
(v1.0)
Snap2320619
300500