DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019533
GeneSnrpc
SynonymsSnrp1c
U1-C
Desc.U1 small nuclear ribonucleoprotein C
LocusNM_011432 chr17:27977032-27988912(+)
DB links


Entrez 20630
MGI 109489
Ensembl ENSMUSG00000024217
Vega OTTMUSG00000023175
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020110
(v2.0)
SnrpcNM_01143220630
35.607148.741818.8137267.08603.16254.228269.09122.4168758.47369.4879
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019533
(v1.0)
Snrpc20630
MGA0.9718
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020110
(v2.0)
Snrpc20630
592/3930.0781350/393-0.2826101/3931.6112272/3930.796493/393-0.0212715/3930.2635
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020110
(v2.0)
Snrpc20630
229/1450.1455143/145-0.135393/1452.8598243/1452.057316/145-1.0755117/145-0.9002
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020110
(v2.0)
Snrpc20630
79.411913857.54
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020110
(v2.0)
Snrpc20630
22.32427728.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
50.658312.9491198.491418.52749.4157
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
13.68386.3325351.42688.34182.47244
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
52.967913.021914.1277
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
51.701912.81916.705
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
20.718527.3402
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
52.998712.843518.3214
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
183.772404.104526.473
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
83.465790.9621
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019533
(v1.0)
SnrpcNM_01143220630
5.0219232.012
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019533
(v1.0)
SnrpcNM_01143220630
1.689880.968815
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019533
(v1.0)
9471H3081H10-3Mm.2265Snrp1c20630
U044127NAP114222-1TC8810123.02033.30243.78493.9893.8963.87993.8126
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019533
(v1.0)
1416197_atMm.308514SnrpcNM_011432.220630
691.1501982.552086.5751105.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019533
(v1.0)
A_51_P157595Snrp1cNM_01143220630
11P0.7590.226P
Proteome N/A