DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019537
GeneSnrpe
Synonyms
Desc.small nuclear ribonucleoprotein E
LocusNM_009227 chr1:135500448-135506857(-)
DB links


Entrez 20643
MGI 98346
Ensembl ENSMUSG00000090553
Vega OTTMUSG00000035312
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020114
(v2.0)
SnrpeNM_00922720643
84.776186.383273.846224.846405.255397.835114.853228.052338.307473.085
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019537
(v1.0)
Snrpe20643
MGA0.99646
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020114
(v2.0)
Snrpe20643
696/4110.2466439/411-0.0211253/4112.8648620/4111.917919/411-2.3178153/411-2.0142
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020114
(v2.0)
Snrpe20643
301/1590.4057190/1590.1399249/1594.1479607/1593.24378/159-2.122562/159-1.9323
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020114
(v2.0)
Snrpe20643
67.749815144.87
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020114
(v2.0)
Snrpe20643
20.115810020.12
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
89.7704188.414167.272281.04681.0907
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
52.1744104.14273.6782140.40938.5103
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
93.863231.0035205.564
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
91.6197186.522169.304
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
225.286169.291
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
93.917730.5788185.687
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
154.868271.361233.285
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
4602.633299.1
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019537
(v1.0)
SnrpeNM_00922720643
170.191130.107
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019537
(v1.0)
SnrpeNM_00922720643
227.391354.595
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019537
(v1.0)
17642L0003E06-3Mm.27669Snrpe20643
U021772NAP099507-001Snrpe;TC935850,TC935846U,F,22.89062.7562.15662.43022.99482.76662.9394
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019537
(v1.0)
1451294_s_atMm.249110SnrpeNM_009227.320643
2155.4253588.3252901.1754539.7752980.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019537
(v1.0)
A_51_P363634SnrpeNM_00922720643
11P0.5280.0987P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019537
(v1.0)
Snrpe20643
110130