DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019541
GeneSnta1
Synonymsalpha1-syntrophin
Snt1
Desc.syntrophin, acidic 1
LocusNM_009228 chr2:154202050-154233820(-)
DB links


Entrez 20648
MGI 101772
Ensembl ENSMUSG00000027488
Vega OTTMUSG00000015793
Featureprotein-coding
GO(BP)
  •   2 Terms
      regulation of vasoconstriction by circulating norepinephrine (GO:0003117)
      neuromuscular junction development (GO:0007528)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020118
(v2.0)
Snta1NM_00922820648
4.589493.346314.496312.70448.04139.8643513.84575.368657.2407813.0949
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019541
(v1.0)
Snta120648
2-Cell Transient0.98069
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020118
(v2.0)
Snta120648
630/3890.1823400/389-0.075898/3891.5825242/3890.6432261/3891.47221455/3891.3016
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020118
(v2.0)
Snta120648
310/1730.327176/173-0.090981/1732.4262193/1731.4757131/1731.6332667/1731.3425
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020118
(v2.0)
Snta120648
54.347212543.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020118
(v2.0)
Snta120648
17.04868520.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019541
(v1.0)
Snta1NM_00922820648
3.479043.126649.462345.593169.98572
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019541
(v1.0)
Snta1FR127144,FR391343,NM_00922820648
8.268957.1102224.531716.157521.6346
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019541
(v1.0)
Snta1NM_00922820648
3.637651.678423.41123
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019541
(v1.0)
Snta1NM_00922820648
3.550713.095243.98179
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019541
(v1.0)
Snta1FR127144,FR391343,NM_00922820648
11.394826.7034
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019541
(v1.0)
Snta1NM_00922820648
3.639771.655434.36709
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019541
(v1.0)
Snta1NM_00922820648
8.760655.400425.01347
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019541
(v1.0)
Snta1FR127144,FR391343,NM_00922820648
7.204847.60039
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019541
(v1.0)
Snta1NM_00922820648
0.07702844.93625
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019541
(v1.0)
Snta1NM_00922820648
0.7116520
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019541
(v1.0)
6568H3028E02-3Mm.1541Snta120648
U023522NAP109023-1Snta1;TC831938,TC831937Q61234U2.8292.80732.80582.86593.21213.12433.0091
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019541
(v1.0)
A_51_P339232Snta1NM_00922820648
11P1.8160.121P
Proteome N/A