DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019552
GeneSnx11
Synonyms
Desc.sorting nexin 11
LocusNM_028965 chr11:96628863-96638869(-)
NM_001163389 chr11:96628863-96638869(-)
DB links


Entrez 74479
MGI 1921729
Ensembl ENSMUSG00000020876
Vega OTTMUSG00000001970
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020129
(v2.0)
Snx11NM_001163389,NM_02896574479
9.5192727.591127.576619.458710.87755.715033.5935436.319612.57219.18409
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019552
(v1.0)
Snx1174479
Maternal RNA0.96333
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020129
(v2.0)
Snx1174479
614/432-0.0056381/432-0.296756/4320.6391207/4320.268521/432-2.2515191/432-1.7687
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020129
(v2.0)
Snx1174479
282/1890.0642173/189-0.242451/1891.6495184/1891.28137/189-2.535956/189-2.3233
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020129
(v2.0)
Snx1174479
94.274715162.43
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020129
(v2.0)
Snx1174479
24.29137831.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
28.675919.078114.42527.531532.54345
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019552
(v1.0)
Snx11FR245243,NM_001163389,NM_02896574479
147.26196.233474.855228.529330.5005
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
29.98333.4812820.8147
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
29.266718.886626.9096
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019552
(v1.0)
Snx11FR245243,NM_001163389,NM_02896574479
463.128695.112
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
30.00073.433629.5135
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
13.35557.271998.63465
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
277.933197.422
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
9.937633.15133
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019552
(v1.0)
Snx11NM_001163389,NM_02896574479
46.149421.0163
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019552
(v1.0)
15500K0152D09-3Mm.264974933439F10Rik74479
U033323NAP097251-0014933439F10Rik;TC799894,TC799886Q91WL6U,F,23.66673.56272.91443.02143.41853.05413.2798
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019552
(v1.0)
1424031_atMm.270781Snx11NM_028965.4,NM_001163389.174479
170.85258.575165.175084.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019552
(v1.0)
A_51_P161429Snx11NM_02896574479
11P1.6870.125P
Proteome N/A