DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019567
GeneSnx27
SynonymsESTM47
Desc.sorting nexin family member 27
LocusNM_029721 chr3:94301466-94386624(-)
NM_001082484 chr3:94304602-94386624(-)
DB links


Entrez 76742
MGI 1923992
Ensembl ENSMUSG00000028136
Vega OTTMUSG00000019563
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020144
(v2.0)
Snx27NM_001082484,NM_02972176742
13.74822.050713.2975513.960220.428311.3316.686123.1853713.604112.0802
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019567
(v1.0)
Snx2776742
MGA0.9522
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020144
(v2.0)
Snx2776742
665/4270.126492/4270.088113/4271.6554260/4270.6126148/4270.5249825/4270.3501
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020144
(v2.0)
Snx2776742
333/1610.5329228/1610.3837108/1612.9335234/1611.854544/1610.1819182/161-0.4194
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020144
(v2.0)
Snx2776742
53.698811646.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020144
(v2.0)
Snx2776742
13.03437317.86
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
4.857715.18515.741717.85944.70461
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019567
(v1.0)
Snx27FR260480,NM_001082484,NM_02972176742
8.666726.9356840.224456.034712.5105
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
5.079184.822915.65694
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
4.957785.132934.84887
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019567
(v1.0)
Snx27FR260480,NM_001082484,NM_02972176742
6.093385.95341
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
5.082134.756855.31807
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
14.574417.24412.7124
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019567
(v1.0)
Snx27FR260480,NM_001082484,NM_02972176742
55.430235.6416
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
3.161437.9078
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019567
(v1.0)
Snx27NM_001082484,NM_02972176742
0.9405121.30264
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019567
(v1.0)
9394H3080E10-3Mm.281605730552M22Rik76742
2.30912.32862.30372.20112.53862.48672.4808
0019567
(v1.0)
20047L0517E12-3Mm.281605730552M22Rik76742
U024340NAP094019-0015730552M22Rik;C79375;TC809597Q9CYB52.52492.33262.88143.62583.38923.63893.652
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019567
(v1.0)
1430037_atMm.28160Snx27NM_029721.1,NM_001082484.176742
0000334.1
0019567
(v1.0)
1433614_atMm.28160Snx27NM_029721.1,NM_001082484.176742
0000793.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019567
(v1.0)
A_52_P240152Snx27AK04120176742
11P0.4850.0942P
Proteome N/A