DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019568
GeneSnx29
SynonymsGm11170
LOC381035
LOC385605
Rundc2a
Desc.sorting nexin 29
LocusNM_028964 chr16:11322997-11755566(+)
DB links


Entrez 74478
MGI 1921728
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020145
(v2.0)
Snx29NM_001290148,NM_02896474478
6.119326.8718811.567710.58216.877260.8174081.471617.182512.29120.558548
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019568
(v1.0)
Rundc2a74478
2-Cell Transient0.94156
0019568
(v1.0)
Snx2974478
Minor ZGA0.99378
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020145
(v2.0)
Snx2974478
761/5270.0172509/527-0.166554/5273.64291523/5272.856428/527-2.1372175/527-2.1801
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020145
(v2.0)
Snx2974478
391/2500.1319279/2500.042517/2504.58371312/2503.709715/250-1.931885/250-2.136
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020145
(v2.0)
Snx2974478
108.561611495.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020145
(v2.0)
Snx2974478
51.94965692.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
4.56855.7984811.72597.649591.21224
0019568
(v1.0)
Snx29NM_02896474478
7.16668.033425.32822.818760.835879
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
6.149689.6581119.802514.84012.80297
0019568
(v1.0)
Snx29NM_02896474478
9.8153610.88988.077864.008461.32409
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
4.776790.8005256.32627
0019568
(v1.0)
Snx29NM_02896474478
7.493332.158598.76464
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
4.662625.740264.34992
0019568
(v1.0)
Snx29NM_02896474478
7.314247.9527612.7542
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
6.626375.60594
0019568
(v1.0)
Snx29NM_02896474478
11.054917.4309
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
4.779560.7895614.77084
0019568
(v1.0)
Snx29NM_02896474478
7.497692.1290313.9884
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
10.85647.3859814.5053
0019568
(v1.0)
Snx29NM_02896474478
4.933092.721624.4911
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
13.690826.0765
0019568
(v1.0)
Snx29NM_02896474478
3.964986.459
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019568
(v1.0)
Rundc2aNM_001163498385605
2.709321.50104
0019568
(v1.0)
Snx29NM_02896474478
2.515270.310756
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019568
(v1.0)
Snx29NM_02896474478
0.9587921.14164
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019568
(v1.0)
18446L0208A01-3Mm.1592184933437K13Rik74478
NAP040959-1TC911145Q9D3S32.81292.60852.61872.65252.52962.54492.5083
MOE430 N/A
Agilent44K N/A
Proteome N/A