DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019569
GeneSnx3
SynonymsSDP3
Desc.sorting nexin 3
LocusNM_017472 chr10:42221860-42255175(+)
DB links


Entrez 54198
MGI 1860188
Ensembl ENSMUSG00000019804
Vega OTTMUSG00000019461
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020146
(v2.0)
Snx3NM_01747254198
136.98653.788140.473189.2071148.49688.861358.066755.8518140.53197.182
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019569
(v1.0)
Snx354198
MGA0.98689
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020146
(v2.0)
Snx354198
760/4040.398549/4040.3255949/4044.79192462/4043.930343/404-1.1558285/404-1.0987
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020146
(v2.0)
Snx354198
458/1900.7534306/1900.5689861/1905.69341996/1904.706114/190-1.6365107/190-1.415
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020146
(v2.0)
Snx354198
63.395315241.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020146
(v2.0)
Snx354198
20.123910618.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019569
(v1.0)
Snx3NM_01747254198
55.916127.971566.3652102.99941.0525
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019569
(v1.0)
Snx3FR016983,NM_01747254198
70.265231.802878.5396125.9250.0936
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019569
(v1.0)
Snx3NM_01747254198
58.465450.097130.5175
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019569
(v1.0)
Snx3NM_01747254198
57.06827.690641.4259
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019569
(v1.0)
Snx3FR016983,NM_01747254198
32.296248.3368
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019569
(v1.0)
Snx3NM_01747254198
58.499349.41145.4345
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019569
(v1.0)
Snx3NM_01747254198
61.443899.449497.0151
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019569
(v1.0)
Snx3FR016983,NM_01747254198
124.559123.687
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019569
(v1.0)
Snx3NM_01747254198
23.6454127.834
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019569
(v1.0)
Snx3NM_01747254198
1.9617.17475
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019569
(v1.0)
11353H3113H04-3Snx354198
U011447NAP004940-001Snx3;TC793108,TC793105,TC793099O70492U,F,24.03684.04334.49564.72834.81384.75924.7971
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019569
(v1.0)
1422480_atMm.277870Snx3NM_017472.454198
875.125451.0251105.12030.1251938.825
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019569
(v1.0)
Snx354198
3.752.519.7562