DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019574
GeneSnx4
Synonyms
Desc.sorting nexin 4
LocusNM_080557 chr16:33251542-33299648(+)
DB links


Entrez 69150
MGI 1916400
Ensembl ENSMUSG00000022808
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020151
(v2.0)
Snx4NM_08055769150
16.79089.1636721.137510.034411.462321.65739.8732514.528310.879822.2877
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019574
(v1.0)
Snx469150
1-Cell Transient0.97222
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020151
(v2.0)
Snx469150
653/3790.2714404/379-0.024173/3792.4325363/3791.263510/379-3.0646125/379-2.186
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020151
(v2.0)
Snx469150
309/1430.5954179/1430.2064161/1433.6635344/1432.57675/143-2.558547/143-2.1689
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020151
(v2.0)
Snx469150
68.698813351.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020151
(v2.0)
Snx469150
20.76068325.01
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019574
(v1.0)
Snx4NM_08055769150
9.5224314.63667.477137.948536.82581
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019574
(v1.0)
Snx4NM_08055769150
10.137214.93975.780058.572936.29287
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
9.956586.1405515.9689
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
9.718614.489710.7364
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
11.27638.84054
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
9.962366.0564511.7753
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
6.922667.674627.54008
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
7.041556.23656
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019574
(v1.0)
Snx4NM_08055769150
32.269721.1266
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019574
(v1.0)
Snx4NM_08055769150
25.104629.8625
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019574
(v1.0)
15544K0203A09-3Mm.28196Snx469150
U017037NAP095480-001TC869372Q91YJ2U,F,22.97362.90722.97442.91052.97932.95812.9188
0019574
(v1.0)
18799L0227H03-3Mm.28196Snx469150
U017037NAP095480-001Snx4;TC869373,TC869372Q91YJ23.28633.20962.85012.75642.40992.66562.5039
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019574
(v1.0)
1460182_atMm.28196Snx4NM_080557.269150
608.31177.9545.1455.225590.575
0019574
(v1.0)
1416396_atMm.28196Snx4NM_080557.269150
56.5250066.540.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019574
(v1.0)
A_51_P516808Snx4NM_08055769150
11P0.7680.23P
0019574
(v1.0)
A_52_P362135Snx4NM_08055769150
11P0.8190.299P
Proteome N/A