DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019576
GeneSnx6
Synonyms
Desc.sorting nexin 6
LocusNM_026998 chr12:55847344-55896649(-)
DB links


Entrez 72183
MGI 1919433
Ensembl ENSMUSG00000005656
Featureprotein-coding
GO(BP)
  •   7 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020153
(v2.0)
Snx6NM_02699872183
21.180343.436346.229849.900774.651841.48631.10136.045662.840240.3317
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019576
(v1.0)
Snx672183
MGA0.96925
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020153
(v2.0)
Snx672183
673/3960.2517382/396-0.167769/3961.0574169/3960.102266/396-0.5206511/396-0.2309
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020153
(v2.0)
Snx672183
322/1590.5026152/159-0.1861/1592.1363146/1591.195412/159-1.5919112/159-1.0945
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020153
(v2.0)
Snx672183
72.837812359.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020153
(v2.0)
Snx672183
16.87576426.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019576
(v1.0)
Snx6NM_02699872183
45.134931.879637.103951.75921.9213
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019576
(v1.0)
Snx6NM_02699872183
58.184542.154648.823571.531.0845
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
47.19277.7458534.7814
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
46.064731.559526.652
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
67.116472.8442
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
47.22017.6397629.2311
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
34.352449.975343.5289
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
70.727757.8547
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019576
(v1.0)
Snx6NM_02699872183
16.747928.7832
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019576
(v1.0)
Snx6NM_02699872183
4.246467.79759
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019576
(v1.0)
9017H3075E01-3Mm.282402810425K19Rik72183
U033950NAP096463-001TC898995,TC898992Q9CZ03U,F,22.25162.65132.71112.78352.392.60792.4483
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019576
(v1.0)
1425148_a_atMm.28240Snx6NM_026998.372183
703.1751792.975863.2751073.725555.4
0019576
(v1.0)
1429497_s_atMm.28240Snx6NM_026998.372183
465.95278.7465.175486.025369.325
0019576
(v1.0)
1451602_atMm.28240Snx6NM_026998.372183
00466.625606.5238.45
0019576
(v1.0)
1447234_s_atMm.28240Snx6NM_026998.372183
1048.2374.725947.1752414.1751489.9
Agilent44K N/A
Proteome N/A