DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019578
GeneSnx8
Synonyms
Desc.sorting nexin 8
LocusNM_172277 chr5:140816257-140865201(-)
DB links


Entrez 231834
MGI 2443816
Ensembl ENSMUSG00000029560
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020155
(v2.0)
Snx8NM_172277231834
45.617713.755212.491518.699216.338210.81637.0660718.282918.92112.0372
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019578
(v1.0)
Snx8231834
2-Cell Transient0.95677
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020155
(v2.0)
Snx8231834
583/447-0.1293349/447-0.472157/4472.0621437/4471.293830/447-1.8055328/447-1.0425
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020155
(v2.0)
Snx8231834
297/210-0.0127172/210-0.402143/2102.9757368/2102.12736/210-2.8774124/210-1.3487
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020155
(v2.0)
Snx8231834
64.960511059.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020155
(v2.0)
Snx8231834
24.85036836.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019578
(v1.0)
Snx8NM_172277231834
14.30178.7441813.946711.30714.9444
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019578
(v1.0)
Snx8NM_172277231834
58.560634.812370.706757.37327.0315
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
14.953816.68299.54009
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
14.59648.6563813.5614
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
52.93112.534
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
14.962516.454414.8737
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
12.912510.917413.1343
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
84.845375.0228
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019578
(v1.0)
Snx8NM_172277231834
5.691224.13881
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019578
(v1.0)
Snx8NM_172277231834
1.911861.32277
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019578
(v1.0)
18492L0210A08-3Mm.27098LOC231834231834
U026890NAP007376-001TC875300,TC875296,TC875295U,F,23.52333.62463.37373.97323.39223.54013.5208
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019578
(v1.0)
A_52_P77245Snx8NM_172277231834
11P1.050.713P
Proteome N/A