DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019598
GeneSon
Synonyms
Desc.Son DNA binding protein
LocusNM_178880 chr16:91648069-91679437(+)
NM_019973 chr16:91648069-91663563(+)
DB links


Entrez 20658
MGI 98353
Ensembl ENSMUSG00000022961
Vega OTTMUSG00000028340
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020174
(v2.0)
SonNM_019973,NM_17888020658
22.358358.950770.521499.2696114.41328.219970.600161.9326108.83324.7906
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019598
(v1.0)
Son20658
Major ZGA0.99539
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020174
(v2.0)
Son20658
679/3230.5576494/3230.4955315/3233.5163930/3232.84737/323-3.296170/323-2.779
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020174
(v2.0)
Son20658
379/1201.1398247/1200.9196300/1204.7888836/1204.10353/120-2.898336/120-2.2888
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020174
(v2.0)
Son20658
53.017717929.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020174
(v2.0)
Son20658
11.10831338.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
61.278348.752173.918279.349949.695
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
262.225255.751381.741366.307257.121
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
64.07218.1765453.1896
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
62.540748.262645.8954
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
267.364157.736
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
64.10948.0645550.3365
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
68.436876.615575.1497
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
240.051185.836
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019598
(v1.0)
SonNM_019973,NM_17888020658
25.916325.044
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019598
(v1.0)
SonNM_019973,NM_17888020658
16.20324.7625
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019598
(v1.0)
6817H3035B06-3Mm.46401Son20658
U043546NAP000348-002Son;TC820508,TC815467Q9QX47U,F,22.96642.99562.85452.91372.37312.89562.8778
0019598
(v1.0)
14681J0747F08-3Mm.46401Son20658
U043546NAP000348-002Son;TC900912,TC820509,TC815467Q9QX47U,F,23.7773.78273.52853.81433.23483.52623.3916
0019598
(v1.0)
15750K0236F11-3Mm.46401Son20658
U043546NAP107192-1Son;TC815468,TC815467Q9QX47U,F,22.85272.64452.79152.69892.77792.76622.7637
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019598
(v1.0)
1435862_atMm.46401SonNM_178880.4,NM_019973.220658
88.975111.1151.725122.4587.375
0019598
(v1.0)
1439074_a_atMm.46401SonNM_178880.4,NM_019973.220658
062.825000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019598
(v1.0)
A_51_P142653SonNM_17888020658
11P0.9880.921P
0019598
(v1.0)
A_52_P54008SonNM_01997320658
11P0.7310.196P
Proteome N/A