DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019636
GeneSp1
SynonymsSp1-1
Desc.trans-acting transcription factor 1
LocusNM_013672 chr15:102236747-102266835(+)
DB links


Entrez 20683
MGI 98372
Ensembl ENSMUSG00000001280
Vega OTTMUSG00000035159
Featureprotein-coding
GO(BP)
  •   18 Terms
      ossification (GO:0001503)
      in utero embryonic development (GO:0001701)
      trophectodermal cell differentiation (GO:0001829)
      liver development (GO:0001889)
      embryonic placenta development (GO:0001892)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      megakaryocyte differentiation (GO:0030219)
      lung development (GO:0030324)
      enucleate erythrocyte differentiation (GO:0043353)
      positive regulation by host of viral transcription (GO:0043923)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      embryonic camera-type eye morphogenesis (GO:0048596)
      embryonic skeletal system development (GO:0048706)
      embryonic process involved in female pregnancy (GO:0060136)
      definitive hemopoiesis (GO:0060216)
GO(MF)
  •   21 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter sequence-specific DNA binding (GO:0000979)
      core promoter proximal region sequence-specific DNA binding (GO:0000987)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      RNA polymerase II repressing transcription factor binding (GO:0001103)
      nucleic acid binding (GO:0003676)
      DNA binding (GO:0003677)
      double-stranded DNA binding (GO:0003690)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein C-terminus binding (GO:0008022)
      transcription factor binding (GO:0008134)
      zinc ion binding (GO:0008270)
      histone acetyltransferase binding (GO:0035035)
      enhancer binding (GO:0035326)
      protein homodimerization activity (GO:0042803)
      histone deacetylase binding (GO:0042826)
      bHLH transcription factor binding (GO:0043425)
      sequence-specific DNA binding (GO:0043565)
      transcription regulatory region DNA binding (GO:0044212)
      metal ion binding (GO:0046872)
      HMG box domain binding (GO:0071837)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020214
(v2.0)
Sp1NM_01367220683
9.259559.5489115.610423.019824.260129.341921.806413.15523.310826.6119
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019636
(v1.0)
Sp120683
Major ZGA0.92917
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020214
(v2.0)
Sp120683
680/4430.1052414/443-0.2134284/4432.9257773/4432.128125/443-2.0464233/443-1.5202
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020214
(v2.0)
Sp120683
333/1860.3258176/186-0.1948220/1863.7586493/1862.72112/186-3.928355/186-2.3257
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020214
(v2.0)
Sp120683
41.281512632.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020214
(v2.0)
Sp120683
11.86859312.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019636
(v1.0)
Sp1NM_01367220683
9.9245710.779117.126616.804415.2669
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019636
(v1.0)
Sp1FR135433,FR182663,FR271479,FR296283,NM_01367220683
24.018521.713635.173536.759832.5819
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019636
(v1.0)
Sp1NM_01367220683
10.37713.3863111.7603
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019636
(v1.0)
Sp1NM_01367220683
10.12910.67099.73011
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019636
(v1.0)
Sp1FR135433,FR182663,FR271479,FR296283,NM_01367220683
23.038922.4688
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019636
(v1.0)
Sp1NM_01367220683
10.38313.3399310.6717
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019636
(v1.0)
Sp1NM_01367220683
15.856516.225316.0337
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019636
(v1.0)
Sp1FR135433,FR182663,FR271479,FR296283,NM_01367220683
38.77239.5117
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019636
(v1.0)
Sp1NM_01367220683
16.536813.6302
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019636
(v1.0)
Sp1NM_01367220683
0.9898752.76655
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019636
(v1.0)
1040C0174E04-3Mm.4618Sp120683
U043484NAP097405-001Sp1;TC926434,TC827360O89087U,F,22.91113.03223.16363.22593.25463.34593.4883
0019636
(v1.0)
5859H3010F05-3Mm.331311110003E12Rik68485
U043484NAP025794-001Sp1;TC930639O89087U,F,23.32863.18073.30653.32623.45413.31193.313
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019636
(v1.0)
1418180_atMm.4618Sp1NM_013672.220683
315.35669.2730.525908.275590.45
0019636
(v1.0)
1454852_atMm.4618Sp1NM_013672.220683
769.225639.175513.551519.8252067.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019636
(v1.0)
A_51_P256919Sp1NM_01367220683
11P0.4430.0816P
Proteome N/A