DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019703
GeneSpc25
SynonymsSpbc25
Desc.SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
LocusNM_025565 chr2:69031952-69044247(-)
NM_001199124 chr2:69031952-69044247(-)
NM_001199123 chr2:69031952-69044247(-)
DB links


Entrez 66442
MGI 1913692
Ensembl ENSMUSG00000005233
Vega OTTMUSG00000012970
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020283
(v2.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
1.741823.450634.959263.855628.483715.771713.912825.430321.906615.9728
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019703
(v1.0)
Spc2566442
2-Cell Transient0.96585
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020283
(v2.0)
Spc2566442
557/3260.2593362/3260.034860/3261.1304150/3260.209998/3260.3201642/3260.3773
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020283
(v2.0)
Spc2566442
283/1180.7443174/1180.440951/1182.2776134/1181.49541/1180.5174259/1180.5311
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020283
(v2.0)
Spc2566442
66.047411955.5
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020283
(v2.0)
Spc2566442
18.53276827.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
24.354524.131847.578419.79799.9329
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
283.147190.626297.828164.986102.22
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
25.46490.63690426.3284
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
24.856223.889518.8452
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
43.429662.7082
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
25.47970.62818120.6687
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
44.050219.115715.1346
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
29.109422.8082
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
12.68240.2338
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019703
(v1.0)
Spc25NM_001199123,NM_001199124,NM_02556566442
5.757753.96078
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019703
(v1.0)
3146C0609F06-32600017H08Rik66442
U022707NAP008193-0012600017H08Rik;2610205L13Rik;TC837372,TC837371,TC837370Q9D1K6U,F,23.01523.32363.23433.52342.7583.01172.9417
0019703
(v1.0)
8718H3071A09-3Mm.260622600017H08Rik66442
U022707NAP008193-0012600017H08Rik;2610205L13Rik;TC837372,TC837371,TC837370Q9D1K6U,F,23.54813.59723.52683.72523.22243.34723.2837
0019703
(v1.0)
14673J0743A05-3Mm.260622600017H08Rik66442
3.58443.49923.75263.5683.95093.77263.8574
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019703
(v1.0)
1424118_a_atMm.272969Spc25NM_001199123.1,NM_001199124.1,NM_025565.366442
556.075523.325928.4213.3314.5
0019703
(v1.0)
1453815_atMm.272969Spc25NM_001199123.1,NM_001199124.1,NM_025565.366442
033.3546.975027.35
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019703
(v1.0)
Spc2566442
010010