DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019742
GeneSpin1
SynonymsSpin
Desc.spindlin 1
LocusNM_146043 chr13:51196267-51244563(+)
NM_011462 chr13:51228168-51247915(+)
DB links


Entrez 20729
MGI 109242
Ensembl ENSMUSG00000021395
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020326
(v2.0)
Spin1NM_001283028,NM_001283029,NM_001283030,NM_011462,NM_14604320729
15.06661541.343467.87738.882129.02114.913129.00343473.46176.8314.4701
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019742
(v1.0)
Spin120729
Maternal RNA0.98542
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020326
(v2.0)
Spin120729
532/441-0.2416333/441-0.528/441-2.052844/441-1.969713/441-2.93371/441-3.207
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020326
(v2.0)
Spin120729
195/140-0.0345125/140-0.27753/140-1.64817/140-2.82372/140-3.528821/140-3.2461
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020326
(v2.0)
Spin120729
71.284216543.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020326
(v2.0)
Spin120729
10.38669910.49
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
2238.423416.68831.742144.33933.4508
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
1406.871849.92474.41890.9277110.182
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
2340.487.95593727.67
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
2284.543382.374220.74
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
1878.392310.13
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
2341.847.846934629.17
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
770.064139.365218.629
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
88.3237132.519
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
4576.011100.47
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019742
(v1.0)
Spin1NM_011462,NM_14604320729
1239.861399.27
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019742
(v1.0)
8605H3068G09-3Spin20729
U014839NAP092875-001Spin;TC885681Q61142U,F,24.06794.20853.3182.84362.18672.15142.1095
0019742
(v1.0)
9613H3084A06-3Mm.42193Spin20729
U014839NAP092873-001Spin;TC885688,TC885681Q61142U,F,24.84735.20054.24343.58653.03513.2293.1378
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019742
(v1.0)
1415794_a_atMm.188432Spin1NM_011462.2,NM_146043.320729
2526.72552592212.15159.125168.1
0019742
(v1.0)
1436809_a_atMm.188432Spin1NM_011462.2,NM_146043.320729
5739.911481.354997.325339547
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019742
(v1.0)
A_51_P195135SpinNM_01146220729
11P0.9190.552P
0019742
(v1.0)
A_52_P50216SpinNM_14604320729
11P0.4490.0794P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019742
(v1.0)
Spin120729
17251745100129