DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019820
GeneSpsb3
SynonymsSSB3
Tce1
Desc.splA/ryanodine receptor domain and SOCS box containing 3
LocusNM_001163751 chr17:25023619-25029092(+)
NM_001163750 chr17:25023619-25029092(+)
NM_027141 chr17:25024426-25029092(+)
DB links


Entrez 79043
MGI 1891471
Ensembl ENSMUSG00000024160
Vega OTTMUSG00000030430
Featureprotein-coding
GO(BP)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020400
(v2.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
70.12456.067985.7813828.731727.141115.09520.794.064724.70316.9184
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019820
(v1.0)
Spsb379043
Major ZGA0.99978
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020400
(v2.0)
Spsb379043
979/6530.0713509/653-0.47481157/6534.4012648/6533.34617/653-3.1324164/653-2.5817
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020400
(v2.0)
Spsb379043
466/2510.3785265/251-0.03771000/2515.52862083/2514.37055/251-3.352571/251-2.3964
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020400
(v2.0)
Spsb379043
97.446919350.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020400
(v2.0)
Spsb379043
29.026712123.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
6.308934.0159621.410618.859114.7728
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
16.28296.0872177.227666.290269.7535
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
6.5965625.64644.3815
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
6.43893.975643.01393
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
3.124946.79906
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
6.6003925.29513.30557
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
19.822918.209217.058
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
47.996833.9535
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
0.287952.04884
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019820
(v1.0)
Spsb3NM_001163750,NM_001163751,NM_02714179043
2.905021.88325
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019820
(v1.0)
1368C0202E06-3Mm.41932Tce179043
Tce1TC9144863.45393.50323.86394.15113.56683.75953.6092
0019820
(v1.0)
17103K0534C04-3Mm.41932Tce179043
U037540NAP001493-0022.79662.88522.79012.7782.85332.82572.7423
0019820
(v1.0)
18900L0234D06-3Mm.41932Tce179043
U017655NAP116900-1Tce1;TC914484,TC801350Q9D7E03.03233.21133.20143.54963.11143.13913.0042
MOE430 N/A
Agilent44K N/A
Proteome N/A