DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019832
GeneSqstm1
SynonymsA170
OSF-6
Osi
p62
STAP
Desc.sequestosome 1
LocusNM_011018 chr11:50013654-50024292(-)
DB links


Entrez 18412
MGI 107931
Ensembl ENSMUSG00000015837
Vega OTTMUSG00000005574
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020418
(v2.0)
Sqstm1NM_001290769,NM_01101818412
166.81217.870324.415939.516361.7042113.122254.07120.348168.369119.264
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019832
(v1.0)
Sqstm118412
MGA0.98764
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020418
(v2.0)
Sqstm118412
608/469-0.138354/469-0.5207269/4692.7676631/4691.753910/469-3.369101/469-2.7962
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020418
(v2.0)
Sqstm118412
273/1790.0956167/179-0.215253/1794.0113583/1793.01726/179-2.651838/179-2.7869
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020418
(v2.0)
Sqstm118412
83.353713064.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020418
(v2.0)
Sqstm118412
10.30315419.08
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
18.317616.518229.090242.0023177.22
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
21.588517.908432.706247.7638207.62
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
19.152760.879818.0218
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
18.694916.352415.1402
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
56.940757.0592
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
19.163860.04616.6053
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
26.93340.554946.8437
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
138.377172.377
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019832
(v1.0)
Sqstm1NM_01101818412
7.850613.28553
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019832
(v1.0)
Sqstm1NM_01101818412
1.106654.77836
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019832
(v1.0)
5942H3013C04-5Sqstm118412
U032722NAP000980-002Sqstm1;TC905423,TC858133Q64337U2.67052.97892.95422.7872.54922.73072.7262
0019832
(v1.0)
16572K0430E12-3Mm.200125Sqstm118412
U032722NAP000980-002Sqstm1;TC905422,TC905421,TC875919,TC858133,TC858132Q64337U3.32583.32053.37993.43563.17223.38743.4016
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019832
(v1.0)
1450957_a_atMm.40828Sqstm1NM_011018.218412
109.425183.325137.075232.15378.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019832
(v1.0)
A_51_P119077Sqstm1NM_01101818412
11P0.5420.103P
Proteome N/A