DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019843
GeneSrek1
SynonymsSfrs12
SRrp508
SRrp86
Desc.splicing regulatory glutamine/lysine-rich protein 1
LocusNM_172592 chr13:104531695-104554662(-)
DB links


Entrez 218543
MGI 2145245
Ensembl ENSMUSG00000032621
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020429
(v2.0)
Srek1NM_172592218543
4.728048.42898.8580412.79414.178611.237416.1998.7137614.178311.0423
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019843
(v1.0)
Srek1218543
MGA0.96437
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020429
(v2.0)
Srek1218543
486/2910.2264437/2910.4699/291-1.320820/291-2.473714/291-2.240746/291-3.2189
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020429
(v2.0)
Srek1218543
185/1100.2352163/1100.44772/110-1.74635/110-2.89775/110-2.192223/110-2.7782
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020429
(v2.0)
Srek1218543
80.54818495.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020429
(v2.0)
Srek1218543
30.07463197.01
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019843
(v1.0)
Srek1NM_172592218543
8.759966.115179.52999.8328311.3306
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019843
(v1.0)
Srek1NM_172592218543
102.29148.022469.221127.509117.275
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
9.159351.729096.67178
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
8.940436.053776.45834
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
52.769148.276
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
9.164671.705417.08329
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
8.82329.493999.79053
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
154.904108.796
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019843
(v1.0)
Srek1NM_172592218543
37.163812.4524
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019843
(v1.0)
Srek1NM_172592218543
8.217489.55748
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019843
(v1.0)
2614C0343H06-3Mm.339088430401B01218543
U035132NAP001100-003SRRP86;TC815277,TC815275U,F,23.1053.15873.29553.72753.29273.59663.4477
0019843
(v1.0)
4501C0938A01-3Mm.339088430401B01218543
U035132NAP001100-003SRRP86;TC815275U,F,22.71912.86432.85642.71552.25442.4522.4105
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019843
(v1.0)
1427134_atMm.458176Srek1NM_172592.2218543
49.3567.0548.17573.12567.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019843
(v1.0)
A_51_P499561Sfrs12NM_172592218543
11P0.6770.167P
0019843
(v1.0)
A_52_P684857Sfrs12NM_172592218543
11P3.6370.0492P
Proteome N/A