DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019859
GeneSrp54c
Synonyms
Desc.signal recognition particle 54C
LocusNM_001100110 chr12:56331465-56364007(+)
DB links


Entrez 100101806
MGI 3714359
Ensembl ENSMUSG00000021020
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020445
(v2.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
3.4926938.50422.55286.885845.815855.687653.3920721.67655.928845.59165
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019859
(v1.0)
Srp54cMaternal RNA0.96462
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020445
(v2.0)
Srp54c100101806
0/000/000/002/01.5850/000/00
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020445
(v2.0)
Srp54c100101806
0/000/000/002/01.5850/000/00
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020445
(v2.0)
Srp54c100101806
040
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020445
(v2.0)
Srp54c100101806
040
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
40.02615.71745.142434.021412.38205
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
41.85091.2773117.148
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
40.850615.559616.0772
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
41.87521.2598217.6329
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
4.761093.882834.10567
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
15.18572.63213
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019859
(v1.0)
Srp54cNM_001100109,NM_001100110,NM_011899100101806
2.296831.96157
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A