DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019876
GeneSrrt
SynonymsArs2
Asr2
Desc.serrate RNA effector molecule homolog (Arabidopsis)
LocusNM_001109910 chr5:137736932-137748902(-)
NM_001109909 chr5:137736932-137748902(-)
NM_031405 chr5:137736932-137748902(-)
DB links


Entrez 83701
MGI 1933527
Ensembl ENSMUSG00000037364
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020463
(v2.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
32.04646.845534.317969.2431221.845350.2820.00324.7335922.207474.3587
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019876
(v1.0)
Srrt83701
MGA0.93418
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020463
(v2.0)
Srrt83701
797/5180.1086412/518-0.4455114/5181.3963350/5180.762818/518-2.7226117/518-2.73
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020463
(v2.0)
Srrt83701
353/1890.3867184/189-0.154102/1892.6356307/1892.01670/189-5.535937/189-2.9019
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020463
(v2.0)
Srrt83701
107.510218259.07
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020463
(v2.0)
Srrt83701
26.57289727.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
7.115773.001686.8782315.169214.0639
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
351.47396.3114440.624738.77793.28
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
7.4401911.71963.2749
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
7.262372.971543.51737
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
29.618531.0016
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
7.4445211.55913.85774
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
6.3681714.646515.4066
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
481.235321.68
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
14.27547.94785
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019876
(v1.0)
SrrtNM_001109909,NM_001109910,NM_03140583701
4.611682.12522
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019876
(v1.0)
13058H3157E09-3Mm.27932Ars2-pending83701
U026841NAP032326-1Ars2;TC809679,TC809678,TC809677,TC809676,TC8096753.26683.22873.34373.66343.433.73963.5384
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019876
(v1.0)
1417655_a_atMm.387734SrrtNM_031405.2,NM_001109909.1,NM_001109910.183701
0000192.7
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019876
(v1.0)
Ars283701
010020