DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019877
GeneSrsf1
SynonymsSfrs1
Desc.serine/arginine-rich splicing factor 1
LocusNM_173374 chr11:87860875-87867259(+)
NM_001078167 chr11:87860875-87867259(+)
DB links


Entrez 110809
MGI 98283
Ensembl ENSMUSG00000018379
Vega OTTMUSG00000001473
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020464
(v2.0)
Srsf1NM_001078167,NM_173374110809
17.816713.049122.2166153.04297.5487111.5975.590121.7654111.87698.7678
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019877
(v1.0)
Srsf1110809
2-Cell Transient0.98578
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020464
(v2.0)
Srsf1110809
825/3190.856554/3190.6784901/3195.04682623/3194.360110/319-2.818986/319-2.4698
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020464
(v2.0)
Srsf1110809
511/1591.1665295/1590.7717855/1595.92352088/1595.02435/159-2.707443/159-2.4451
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020464
(v2.0)
Srsf1110809
46.252720322.78
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020464
(v2.0)
Srsf1110809
22.968217812.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
14.356516.251120.61171.659357.0428
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019877
(v1.0)
Srsf1FR051711,NM_001078167,NM_173374110809
51.656357.0197427.499243.907167.706
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
15.0116.8324817.7302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
14.652216.087917.0216
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019877
(v1.0)
Srsf1FR051711,NM_001078167,NM_173374110809
68.068652.6543
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
15.01976.7388918.6687
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
111.66769.189981.842
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019877
(v1.0)
Srsf1FR051711,NM_001078167,NM_173374110809
207.34247.31
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
21.461556.3216
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019877
(v1.0)
Srsf1NM_001078167,NM_173374110809
0.6673522.31038
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019877
(v1.0)
1452430_s_atMm.391719Srsf1NM_001078167.1,NM_173374.3110809
63.25181.4613.7197.171.475
0019877
(v1.0)
1428099_a_atMm.391719Srsf1NM_001078167.1,NM_173374.3110809
830.8172.6252832.5253236.71832.15
0019877
(v1.0)
1430982_atMm.391719Srsf1NM_001078167.1,NM_173374.3110809
50.7550.2362.8325.475195.425
0019877
(v1.0)
1434972_x_atMm.391719Srsf1NM_001078167.1,NM_173374.3110809
688.4123.72695.5252786.451537.475
0019877
(v1.0)
1428100_atMm.391719Srsf1NM_001078167.1,NM_173374.3110809
0029.17564.35225.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019877
(v1.0)
A_51_P485899Sfrs1NM_173374110809
11P1.0730.648P
Proteome N/A