DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019885
GeneSrsf6
SynonymsSfrs6
Desc.serine/arginine-rich splicing factor 6
LocusNM_026499 chr2:162757244-162762856(+)
DB links


Entrez 67996
MGI 1915246
Ensembl ENSMUSG00000016921
Vega OTTMUSG00000001060
Featureprotein-coding
GO(BP)
  •   1 Terms
      negative regulation of mRNA splicing, via spliceosome (GO:0048025)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020472
(v2.0)
Srsf6NM_02649967996
25.86384.781595.3769983.934143.15359.761559.42873.14408137.67759.45
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019885
(v1.0)
Srsf667996
MGA0.98733
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020472
(v2.0)
Srsf667996
707/3770.3934469/3770.1983603/3774.23531524/3773.337963/377-0.5165492/377-0.2146
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020472
(v2.0)
Srsf667996
383/1530.807228/1530.4567590/1535.44061389/1534.491219/153-0.9164108/153-1.0912
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020472
(v2.0)
Srsf667996
87.578316652.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020472
(v2.0)
Srsf667996
21.06089621.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019885
(v1.0)
Srsf6NM_02649967996
4.968783.7162462.465299.294641.9487
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019885
(v1.0)
Srsf6FR153012,NM_02649967996
26.02112.0038383.952663.617160.859
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019885
(v1.0)
Srsf6NM_02649967996
5.195319.458664.0545
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019885
(v1.0)
Srsf6NM_02649967996
5.071143.678922.32968
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019885
(v1.0)
Srsf6FR153012,NM_02649967996
12.525618.5674
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019885
(v1.0)
Srsf6NM_02649967996
5.198339.329112.55511
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019885
(v1.0)
Srsf6NM_02649967996
57.83395.872995.1219
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019885
(v1.0)
Srsf6FR153012,NM_02649967996
733.036761.217
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019885
(v1.0)
Srsf6NM_02649967996
10.404417.8213
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019885
(v1.0)
Srsf6NM_02649967996
2.129344.18468
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019885
(v1.0)
13186H3159G01-31210001E11Rik67996
U002775NAP002467-0011210001E11Rik;TC930119,TC930117,TC881260Q9CZH6U,F,22.76462.72713.41513.79613.01853.18653.0099
0019885
(v1.0)
21038L0826E03-3Mm.240421210001E11Rik67996
U002775NAP002467-0011210001E11Rik;TC930117Q9CZH6U,F,22.78912.83992.65952.94672.72992.8072.8102
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019885
(v1.0)
1416720_atMm.24042Srsf6NM_026499.467996
174.075231.6220.725279.575215.775
0019885
(v1.0)
1447898_s_atMm.24042Srsf6NM_026499.467996
765.65644.6751229.71949.6253098.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019885
(v1.0)
A_52_P543824Sfrs6NM_02649967996
11P1.1630.516P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019885
(v1.0)
Sfrs667996
100100