DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019887
GeneSrsf9
SynonymsSfrs9
SRp30c
Desc.serine/arginine-rich splicing factor 9
LocusNM_025573 chr5:115777186-115783089(+)
NR_036616 chr5:115777186-115783089(+)
DB links


Entrez 108014
MGI 104896
Ensembl ENSMUSG00000029538
Vega OTTMUSG00000014654
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020474
(v2.0)
Srsf9NM_025573,NR_036616108014
42.931713.450710.963847.9207122.48229.367245.757612.9519113.17728.283
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019887
(v1.0)
Srsf9108014
MGA0.98532
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020474
(v2.0)
Srsf9108014
681/3770.3395389/377-0.0708230/3772.8487524/3771.799411/377-2.9315143/377-1.9865
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020474
(v2.0)
Srsf9108014
297/1240.7426173/1240.3617205/1244.1987455/1243.1813/124-2.944162/124-1.5761
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020474
(v2.0)
Srsf9108014
97.324217057.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020474
(v2.0)
Srsf9108014
23.21759324.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019887
(v1.0)
Srsf9NM_025573108014
13.9867.633135.721284.992632.4397
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019887
(v1.0)
Srsf9NM_025573,NR_036616108014
20.649915.32766.004165.4871.169
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019887
(v1.0)
Srsf9NM_025573108014
14.623715.70168.32788
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019887
(v1.0)
Srsf9NM_025573108014
14.27427.556469.60414
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019887
(v1.0)
Srsf9NM_025573,NR_036616108014
15.93315.4711
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019887
(v1.0)
Srsf9NM_025573108014
14.632215.486510.5335
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019887
(v1.0)
Srsf9NM_025573108014
33.072282.063778.1672
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019887
(v1.0)
Srsf9NM_025573,NR_036616108014
196.998196.669
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019887
(v1.0)
Srsf9NM_025573108014
2.307136.65156
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019887
(v1.0)
Srsf9NM_025573108014
2.618571.40741
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019887
(v1.0)
21556L0859G02-3Mm.29426Sfrs9108014
U026628NAP104531-12010003O18Rik;TC905655Q9D8F42.71622.5752.64082.59642.86632.82912.7683
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019887
(v1.0)
1417727_atMm.287826Srsf9NM_025573.3108014
200.325160.125293.91179.1729.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019887
(v1.0)
A_51_P336691Sfrs9NM_025573108014
11P0.7370.211P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019887
(v1.0)
Sfrs9108014
100100