DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019892
GeneSsb
Synonymsautoantigen La
La protein
SS-B
Desc.Sjogren syndrome antigen B
LocusNM_009278 chr2:69699619-69709903(+)
NM_001110145 chr2:69699619-69709903(+)
DB links


Entrez 20823
MGI 98423
Ensembl ENSMUSG00000068882
Vega OTTMUSG00000013038
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020479
(v2.0)
SsbNM_001110145,NM_00927820823
38.6951456.367331.95476.20887.5618237.41583.4245210.65593.7675248.303
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019892
(v1.0)
Ssb20823
Maternal RNA0.94388
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020479
(v2.0)
Ssb20823
500/3070.1903390/3070.2283148/3072.5022340/3071.47146/307-0.6692327/307-0.5063
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020479
(v2.0)
Ssb20823
247/1270.4439176/1270.3521143/1273.6507332/1272.69376/127-2.170150/127-1.9124
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020479
(v2.0)
Ssb20823
40.43529741.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020479
(v2.0)
Ssb20823
11.09376217.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
474.026228.6356.703760.699158.8312
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
1028.88699.48164.599136.952131.453
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
495.63814.1512249.44
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
483.792226.334155.927
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
5456.261171.03
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
495.92613.9573171.016
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
52.498858.607465.1639
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
536.093729.586
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
1462.9162.538
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019892
(v1.0)
SsbNM_001110145,NM_00927820823
44.671999.9873
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019892
(v1.0)
16776K0504C08-3Mm.10508Ssb20823
U001875NAP002748-002Ssb;TC919132,TC919125,TC919122P32067U,F,22.73112.48212.23692.1672.55792.78092.8308
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019892
(v1.0)
1453928_a_atMm.10508SsbNM_009278.4,NM_001110145.120823
1713.0251639.025398.725220.15424.7
0019892
(v1.0)
1416421_a_atMm.10508SsbNM_009278.4,NM_001110145.120823
159.05634.1537.925047.375
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019892
(v1.0)
Ssb20823
1.22.211.43.41