DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019962
GeneStag1
SynonymsSA-1
Scc3
Desc.stromal antigen 1
LocusNM_009282 chr9:100544042-100858963(+)
DB links


Entrez 20842
MGI 1098658
Ensembl ENSMUSG00000037286
Vega OTTMUSG00000034031
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020551
(v2.0)
Stag1NM_00928220842
6.337355.8655513.66121.334314.8411.083219.14449.5538417.21459.45586
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019962
(v1.0)
Stag120842
2-Cell Transient0.9079
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020551
(v2.0)
Stag120842
706/3620.4498429/3620.1284212/3622.7884587/3622.021128/362-1.6006192/362-1.5069
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020551
(v2.0)
Stag120842
401/1610.7999191/1610.1295206/1613.8588567/1613.12776/161-2.502651/161-2.2245
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020551
(v2.0)
Stag120842
42.698712733.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020551
(v2.0)
Stag120842
4.8766845.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019962
(v1.0)
Stag1NM_00928220842
6.094529.4200715.881110.284613.4355
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019962
(v1.0)
Stag1NM_00928220842
45.286867.3403119.44870.229891.6222
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
6.372382.3176310.2775
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
6.220079.325487.06821
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
72.411412.7206
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
6.376082.285897.75217
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
14.70349.9302211.8843
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
125.617114.704
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019962
(v1.0)
Stag1NM_00928220842
2.8831913.0849
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019962
(v1.0)
Stag1NM_00928220842
3.858063.31155
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019962
(v1.0)
2682C0351F10-3U010915NAP000572-001Stag1;TC854371,TC811032O08982U3.39813.34992.87073.09963.11573.25453.2365
0019962
(v1.0)
10450H3096H05-3Mm.173870U010915NAP035475-1Stag1;O08982U3.02973.00823.25163.16533.07043.22433.0673
0019962
(v1.0)
10803H3103G10-3Mm.42135Stag120842
U010915NAP092542-001Stag1;TC854371O08982U3.15663.11622.80422.82063.0113.06783.0773
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019962
(v1.0)
1421939_a_atMm.42135Stag1NM_009282.320842
20.0552.845.1044.35
0019962
(v1.0)
1431921_a_atMm.42135Stag1NM_009282.320842
168.3273.8236.075186.225332.8
0019962
(v1.0)
1434189_atMm.42135Stag1NM_009282.320842
284.1439.775340.65310.975820.25
0019962
(v1.0)
1441724_atMm.42135Stag1NM_009282.320842
000251.725278.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019962
(v1.0)
A_52_P267446Stag1NM_00928220842
11P2.0140.0902P
0019962
(v1.0)
A_52_P491861Stag1NM_00928220842
11P1.2750.248P
Proteome N/A