DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020022
GeneStk38
SynonymsNdr1
Desc.serine/threonine kinase 38
LocusNM_134115 chr17:29107830-29144882(-)
DB links


Entrez 106504
MGI 2442572
Ensembl ENSMUSG00000024006
Vega OTTMUSG00000031637
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020611
(v2.0)
Stk38NM_134115106504
14.869920.564236.639848.766835.043140.669521.166738.069934.472836.0921
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020022
(v1.0)
Stk38106504
2-Cell Transient0.91582
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020611
(v2.0)
Stk38106504
613/3710.2111334/371-0.267228/3712.8586532/3711.844226/371-1.7387154/371-1.8576
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020611
(v2.0)
Stk38106504
301/1400.5881160/1400.0759207/1404.0523473/1403.0651/140-4.113843/140-2.2627
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020611
(v2.0)
Stk38106504
44.430912236.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020611
(v2.0)
Stk38106504
10.23918611.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020022
(v1.0)
Stk38NM_134115106504
21.377225.277936.272324.248114.8042
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020022
(v1.0)
Stk38NM_134115106504
30.5129.890847.385730.025920.9173
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
22.35185.4380727.5787
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
21.817625.024128.1614
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
31.882536.7201
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
22.36485.3635930.8864
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
33.582523.412523.8922
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
30.870931.3274
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020022
(v1.0)
Stk38NM_134115106504
54.609722.4385
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020022
(v1.0)
Stk38NM_134115106504
15.371211.4327
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020022
(v1.0)
12447H3143G10-3Mm.183034AA617404106504
U037619NAP095269-001AA617404;TC919956Q91VJ4U,F,23.42593.34423.00923.21663.13513.06493.1321
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020022
(v1.0)
1416252_atMm.439986Stk38NM_134115.2106504
270.425454.4351.825623.15416.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020022
(v1.0)
A_51_P469661Stk38NM_134115106504
11P0.9250.589P
Proteome N/A