DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020026
GeneStk40
Synonyms
Desc.serine/threonine kinase 40
LocusNM_001145827 chr4:125781201-125818273(+)
NM_028800 chr4:125781201-125818273(+)
DB links


Entrez 74178
MGI 1921428
Ensembl ENSMUSG00000042608
Vega OTTMUSG00000009292
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020615
(v2.0)
Stk40NM_001145827,NM_02880074178
8.9644914.675120.719629.03959.36367.609261.9856429.313110.62337.54442
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020026
(v1.0)
Stk4074178
Major ZGA0.97973
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020615
(v2.0)
Stk4074178
723/590-0.2191419/590-0.6087133/5901.4332416/5900.824514/590-3.25168/590-2.4011
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020615
(v2.0)
Stk4074178
346/2080.2204175/208-0.3634119/2082.7257375/2082.16817/208-2.671254/208-2.5119
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020615
(v2.0)
Stk4074178
89.129615756.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020615
(v2.0)
Stk4074178
14.4588018.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
15.259314.390121.63756.515461.38516
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
109.188124.965137.36448.41118.76586
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
15.9553.2784115.7
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
15.573714.245721.6789
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
187.089194.939
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
15.96433.233523.7767
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
20.0336.290947.35854
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
70.155565.8099
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
10.856912.3139
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020026
(v1.0)
Stk40NM_001145827,NM_02880074178
2.1544712.0483
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020026
(v1.0)
9681H3084H11-3Mm.221932310004N11Rik74178
U004813NAP005744-0012310004N11Rik;TC910005Q9D7K3U,F,23.10862.98193.39013.89483.8843.69873.9077
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020026
(v1.0)
1429650_atMm.440269Stk40NM_001145827.1,NM_028800.374178
00150.025096.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020026
(v1.0)
A_51_P363657Stk40NM_02880074178
11P0.01*0.0042P
Proteome N/A