DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020047
GeneStrap
SynonymsC78091
Unrip
Desc.serine/threonine kinase receptor associated protein
LocusNM_011499 chr6:137683603-137700451(+)
DB links


Entrez 20901
MGI 1329037
Ensembl ENSMUSG00000030224
Vega OTTMUSG00000023526
Featureprotein-coding
GO(BP)
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      phosphorylation (GO:0016310)
      negative regulation of transforming growth factor beta receptor signaling pathway (GO:0030512)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020637
(v2.0)
StrapNM_01149920901
38.360837.218373.654242.013314.06773.156768.445961.8792293.99494.734
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020047
(v1.0)
Strap20901
Major ZGA0.99522
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020637
(v2.0)
Strap20901
611/3680.2181468/3680.23288/3683.2056590/3682.004990/3680.0258743/3680.4133
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020637
(v2.0)
Strap20901
368/1970.387253/1970.2436282/1974.0374559/1972.820232/197-0.55261/197-0.1925
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020637
(v2.0)
Strap20901
53.923614636.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020637
(v2.0)
Strap20901
22.093211219.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020047
(v1.0)
StrapNM_01149920901
38.678350.9386180.219218.20248.7448
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020047
(v1.0)
StrapNM_01149920901
2605.953146.5316606.612314.31837.9
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020047
(v1.0)
StrapNM_01149920901
40.441814.028955.5751
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020047
(v1.0)
StrapNM_01149920901
39.475250.427145.7769
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020047
(v1.0)
StrapNM_01149920901
225.607258.055
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020047
(v1.0)
StrapNM_01149920901
40.465313.836850.2065
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020047
(v1.0)
StrapNM_01149920901
166.855210.682202.9
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020047
(v1.0)
StrapNM_01149920901
3618.783605.68
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020047
(v1.0)
StrapNM_01149920901
12.3669154.166
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020047
(v1.0)
StrapNM_01149920901
26.629712.9879
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020047
(v1.0)
7134H3043B04-3Strap20901
U007505NAP005800-001Strap;TC913650Q9Z1Z2U,F,23.65353.60983.76294.17073.64713.78943.7891
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020047
(v1.0)
1416566_atMm.22584StrapNM_011499.320901
306.825347.675876.1751075.61004.55
0020047
(v1.0)
1419912_s_atMm.22584StrapNM_011499.320901
122.3105.825161.35210.55203.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020047
(v1.0)
A_51_P446781StrapNM_01149920901
11P0.8650.385P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020047
(v1.0)
Strap20901
4324113