DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020051
GeneStrn3
SynonymsSG2NA
Desc.striatin, calmodulin binding protein 3
LocusNM_052973 chr12:52709528-52792901(-)
NM_001172098 chr12:52709528-52792901(-)
DB links


Entrez 94186
MGI 2151064
Ensembl ENSMUSG00000020954
Featureprotein-coding
GO(BP)
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      response to estradiol stimulus (GO:0032355)
      negative regulation of intracellular estrogen receptor signaling pathway (GO:0033147)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020643
(v2.0)
Strn3NM_001172098,NM_05297394186
10.29953.478856.3900945.9798110.75818.631227.66073.7524287.61819.883
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020051
(v1.0)
Strn394186
MGA0.99429
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020643
(v2.0)
Strn394186
775/3170.775526/3170.6128504/3174.21871257/3173.308516/317-2.181992/317-2.3651
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020643
(v2.0)
Strn394186
496/1361.3475318/1361.1036489/1365.32691178/1364.42075/136-2.488258/136-1.8022
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020643
(v2.0)
Strn394186
24.064711720.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020643
(v2.0)
Strn394186
2.8097933.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
3.615744.419334.231276.880919.5054
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020051
(v1.0)
Strn3FR277206,FR285575,NM_001172098,NM_05297394186
40.679436.4584253.32435.309110.758
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
3.780593.766184.82155
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
3.690234.374932.76704
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
197.474167.934
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
3.782793.71463.0348
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
31.692874.231660.4466
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020051
(v1.0)
Strn3FR277206,FR285575,NM_001172098,NM_05297394186
689.621569.821
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
4.9670124.1157
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020051
(v1.0)
Strn3NM_001172098,NM_05297394186
0.6491571.12127
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020051
(v1.0)
2136C0294H12-3Mm.208510U033931NAP033265-1Strn3;TC860663Q9ERG2U,F,22.20532.41362.5862.93542.72623.13962.938
0020051
(v1.0)
19319L0265G03-3Mm.23222Strn394186
U033931NAP010935-001Strn3;TC842418,TC842417Q9ERG2U,F,22.79952.91312.87123.28763.12933.25193.2515
0020051
(v1.0)
20361L0541C10-3Mm.23222Strn394186
U033931NAP010935-001Strn3;TC842417Q9ERG2U,F,23.99244.39074.84414.54093.98854.3574.047
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020051
(v1.0)
1423535_atMm.65979Strn3NM_052973.2,NM_001172098.194186
43.150356.075830330.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020051
(v1.0)
A_52_P140604Strn3NM_05297394186
11P0.8030.272P
Proteome N/A