DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020052
GeneStrn4
SynonymsZIN
zinedin
Desc.striatin, calmodulin binding protein 4
LocusNM_133789 chr7:17401238-17426280(+)
NM_001039878 chr7:17401238-17426280(+)
DB links


Entrez 97387
MGI 2142346
Ensembl ENSMUSG00000030374
Vega OTTMUSG00000024621
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020644
(v2.0)
Strn4NM_001039878,NM_13378997387
21.593648.521539.50567.085369.8745319.299921.911250.098310.684418.561
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020052
(v1.0)
Strn497387
Maternal RNA0.99648
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020644
(v2.0)
Strn497387
987/5020.4618494/502-0.1391170/5022.0129465/5021.216721/502-2.4662207/502-1.8698
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020644
(v2.0)
Strn497387
394/2150.3596214/215-0.122379/2152.0956191/2151.15139/215-2.3961100/215-1.6887
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020644
(v2.0)
Strn497387
44.946411240.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020644
(v2.0)
Strn497387
13.94995425.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
50.448127.44745.277356.8401415.5195
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
1311.34647.332123.237218.213369.437
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
52.74817.8975329.9457
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
51.487427.171837.1547
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
406.918405.464
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
52.77887.7893640.75
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
4.8866.604437.42359
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
223.106177.157
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
5.593390.802827
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020052
(v1.0)
Strn4NM_001039878,NM_13378997387
0.7904070.946162
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020052
(v1.0)
19577L0282F05-3Mm.21612Strn497387
U007718NAP096109-001C80611;TC847752,TC847747,TC847746P58404U,F3.96574.01564.03043.96034.244.16874.114
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020052
(v1.0)
A_51_P234833Strn4NM_13378997387
11P0.580.116P
Proteome N/A