DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020067
GeneStx5a
SynonymsD19Ertd627e
syntaxin 5
Desc.syntaxin 5A
LocusNM_001167799 chr19:8815914-8830132(+)
NM_019829 chr19:8816293-8830132(+)
DB links


Entrez 56389
MGI 1928483
Ensembl ENSMUSG00000010110
Vega OTTMUSG00000039850
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      SNARE interactions in vesicular transport (mmu04130)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020659
(v2.0)
Stx5aNM_001167799,NM_01982956389
30.0573225.555253.45824.862216.786222.134630.5929291.11525.237224.5984
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020067
(v1.0)
Stx5a56389
Maternal RNA0.99662
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020659
(v2.0)
Stx5a56389
809/5000.1811608/5000.16561385/5005.03743987/5004.319711/500-3.33592/500-3.0209
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020659
(v2.0)
Stx5a56389
440/2310.4152315/2310.331059/2315.72532541/2314.77576/231-3.012444/231-2.9491
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020659
(v2.0)
Stx5a56389
51.387313737.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020659
(v2.0)
Stx5a56389
24.054210323.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
234.421175.60518.528911.665921.5156
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_001177347,NM_019829,NM_13413956389
2275.941531.29777.361688.906301.785
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
245.10910.9926191.589
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
239.251173.842215.665
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
1264.311451.1
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
245.25110.842236.534
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
17.154911.263917.618
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
106.878187.558
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
69.610821.6411
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020067
(v1.0)
Stx5aNM_001167799,NM_01982956389
2.925310.838546
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020067
(v1.0)
12416H3143D08-3Mm.155712Stx5a56389
U019123NAP007972-001Stx5a;TC863682,TC863681Q99J28U,F,23.90974.06654.31864.07864.05994.16214.0964
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020067
(v1.0)
1448267_atMm.153061Stx5aNM_019829.4,NM_001167799.156389
395.625224.32521600
0020067
(v1.0)
1449679_s_atMm.153061Stx5aNM_019829.4,NM_001167799.156389
2992.9752313.5751415.475353.725329.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020067
(v1.0)
A_51_P294550Stx5aNM_01982956389
11P1.0630.68P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020067
(v1.0)
Stx5a56389
160160