DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020115
GeneSumo2
SynonymsSmt3b
Smt3h2
Desc.SMT3 suppressor of mif two 3 homolog 2 (yeast)
LocusNM_133354 chr11:115384423-115397544(-)
DB links


Entrez 170930
MGI 2158813
Ensembl ENSMUSG00000020738
Vega OTTMUSG00000003474
Featureprotein-coding
GO(BP)
  •   3 Terms
      protein sumoylation (GO:0016925)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM N/A
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020115
(v1.0)
Sumo2170930
MGA0.95346
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020709
(v2.0)
Sumo2170930
619/3680.2368423/3680.0845125/3682.008324/3681.142225/368-1.7816245/368-1.1813
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020709
(v2.0)
Sumo2170930
356/1690.5593224/1690.2887119/1693.007303/1692.1579/169-2.056377/169-1.7138
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020709
(v2.0)
Sumo2170930
42.347910141.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020709
(v2.0)
Sumo2170930
12.51996918.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020115
(v1.0)
Sumo2NM_133354170930
181.3057.00047281.933742.074149.378
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020115
(v1.0)
Sumo2NM_133354,NR_030454_dup1170930
0.055828900.04778010.2694470.0205263
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020115
(v1.0)
Sumo2NM_133354170930
189.57134.25527.63766
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020115
(v1.0)
Sumo2NM_133354170930
185.046.930182.15962
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020115
(v1.0)
Sumo2NM_133354170930
189.68133.7862.3686
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020115
(v1.0)
Sumo2NM_133354170930
261.026716.502584.213
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020115
(v1.0)
Sumo2NM_133354,NR_030454_dup1170930
0.26650.0455381
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020115
(v1.0)
Sumo2NM_133354170930
98.5722530.795
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020115
(v1.0)
Sumo2NM_133354170930
3.421539.57399
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020115
(v1.0)
19209L0257C08-3Mm.29923Smt3h2170930
TC897342,TC897337,TC897336,TC897333,TC897332,TC897330U,F,24.27743.82154.33125.07965.06164.93424.5548
0020115
(v1.0)
21221L0840G01-3Mm.29923Smt3h2170930
U043381NAP099152-0011700010P07Rik;Q9DA37U,F3.24763.03242.81283.02552.93472.99013.0382
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020115
(v1.0)
1415781_a_atMm.29923Sumo2NM_133354.2170930
4415.35378.6255689.711594.254871.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020115
(v1.0)
A_51_P427906Sumo2NM_133354170930
11P0.980.872P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020115
(v1.0)
Sumo2170930
210210