DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020135
GeneSusd3
Synonyms
Desc.sushi domain containing 3
LocusNM_028340 chr13:49326200-49344075(-)
NM_025491 chr13:49326202-49343532(-)
DB links


Entrez 66329
MGI 1913579
Ensembl ENSMUSG00000021384
Vega OTTMUSG00000027688
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020730
(v2.0)
Susd3NM_025491,NM_02834066329
9.4291337.99118.51518.2764110.90010.5839260.05270326.701611.81860.48163
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020135
(v1.0)
Susd366329
Maternal RNA0.96294
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020730
(v2.0)
Susd366329
669/513-0.1295368/513-0.594124/5131.5303527/5131.3658121/513-0.026766/513-0.0209
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020730
(v2.0)
Susd366329
327/1900.2692175/190-0.2335100/1902.6001427/1902.483987/1900.9161547/1900.9226
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020730
(v2.0)
Susd366329
64.886313946.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020730
(v2.0)
Susd366329
13.91478017.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020135
(v1.0)
Susd3NM_02549166329
39.49412.79496.168247.559260.0339153
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020135
(v1.0)
Susd3NM_02549166329
48.380914.40937.321519.0980.0382649
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
41.29463.4483313.9595
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
40.307612.666419.7811
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
14.632923.0603
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
41.31863.401121.6953
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
5.710837.298768.18039
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
8.9996310.4069
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020135
(v1.0)
Susd3NM_02549166329
3.915661.37804
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020135
(v1.0)
Susd3NM_02549166329
100.07489.6732
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020135
(v1.0)
1428975_atMm.34308Susd3NM_025491.366329
455.55714.525329.6500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020135
(v1.0)
A_51_P489887Susd3NM_02549166329
11P2.0840.086P
Proteome N/A