DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020194
GeneSyngr2
Synonymscellugyrin
Clast2
Desc.synaptogyrin 2
LocusNM_009304 chr11:117670981-117675600(+)
DB links


Entrez 20973
MGI 1328324
Ensembl ENSMUSG00000048277
Vega OTTMUSG00000003678
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020792
(v2.0)
Syngr2NM_00930420973
75.02579.390329.9799729.515921.20933.014625.309612.952614.203829.632
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020194
(v1.0)
Syngr220973
2-Cell Transient0.96694
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020792
(v2.0)
Syngr220973
905/5280.2641428/528-0.418295/5281.1089351/5280.739583/528-0.6056646/528-0.3077
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020792
(v2.0)
Syngr220973
407/2170.3929197/217-0.254492/2172.3002321/2171.88459/2170.1757411/2170.3208
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020792
(v2.0)
Syngr220973
90.339814861.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020792
(v2.0)
Syngr220973
19.93036630.2
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020194
(v1.0)
Syngr2NM_00930420973
9.76386.9401722.010414.746317.9334
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020194
(v1.0)
Syngr2FR371407,NM_009304,NM_02782720973
40.785128.839883.033487.72550.4073
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020194
(v1.0)
Syngr2NM_00930420973
10.20927.43777.57187
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020194
(v1.0)
Syngr2NM_00930420973
9.964956.870489.63087
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020194
(v1.0)
Syngr2FR371407,NM_009304,NM_02782720973
22.507423.8018
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020194
(v1.0)
Syngr2NM_00930420973
10.214927.061910.5628
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020194
(v1.0)
Syngr2NM_00930420973
20.378214.23829.89642
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020194
(v1.0)
Syngr2FR371407,NM_009304,NM_02782720973
55.891142.5968
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020194
(v1.0)
Syngr2NM_00930420973
8.0991615.9915
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020194
(v1.0)
Syngr2NM_00930420973
38.105818.4762
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020194
(v1.0)
12099H3133E09-3Mm.2079Syngr220973
U013606NAP000558-0029030621K19Rik;Syngr2;TC905345,TC819654,TC819651O55101U,F,23.57873.53733.87573.65534.06183.91343.9724
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020194
(v1.0)
1417081_a_atMm.468228Syngr2NM_009304.220973
100.4135.775129.45120.475330.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020194
(v1.0)
A_51_P105986Syngr2NM_00930420973
11P0.4860.0917P
Proteome N/A