DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020272
GeneTaf11
Synonyms28kDa
PRO214
TAF2I
TAFII28
Desc.TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_026836 chr17:28038073-28044669(-)
DB links


Entrez 68776
MGI 1916026
Ensembl ENSMUSG00000024218
Vega OTTMUSG00000024178
Featureprotein-coding
GO(BP)
  •   4 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      transcription initiation from RNA polymerase II promoter (GO:0006367)
      positive regulation by host of viral transcription (GO:0043923)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020870
(v2.0)
Taf11NM_02683668776
22.449224.028141.910277.287786.260619.080522.576727.151774.527424.5825
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020272
(v1.0)
Taf1168776
Major ZGA0.96631
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020870
(v2.0)
Taf1168776
849/4880.2855518/488-0.0301404/4883.29671171/4882.587919/488-2.5633144/488-2.348
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020870
(v2.0)
Taf1168776
470/1850.8289252/1850.3281302/1854.2212874/1853.55367/185-2.505767/185-2.0402
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020870
(v2.0)
Taf1168776
71.172520035.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020870
(v2.0)
Taf1168776
16.534111114.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020272
(v1.0)
Taf11NM_02683668776
24.982429.072457.513159.686315.9714
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020272
(v1.0)
Taf11NM_02683668776
30.488632.103465.367469.89719.3831
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
26.12148.2098931.7186
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
25.497128.780520.13
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
32.597323.4752
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
26.13668.0974422.0779
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
53.248257.629551.7014
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
69.143461.8089
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020272
(v1.0)
Taf11NM_02683668776
15.348968.0986
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020272
(v1.0)
Taf11NM_02683668776
40.332331.9057
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020272
(v1.0)
18520L0211B04-31110038O14Rik68776
U037600NAP007050-0011110038O14Rik;TC920096Q99JX1U,F,23.90494.05063.64863.96113.3773.60633.4723
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020272
(v1.0)
1451995_atMm.267998Taf11NM_026836.268776
00103.275071.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020272
(v1.0)
A_51_P410127Taf11NM_02683668776
11P0.7260.193P
0020272
(v1.0)
A_52_P230628Taf11NM_02683668776
11P0.770.232P
Proteome N/A