DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020274
GeneTaf13
Synonyms
Desc.TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_025444 chr3:108374617-108384986(+)
DB links


Entrez 99730
MGI 1913500
Ensembl ENSMUSG00000048100
Vega OTTMUSG00000007260
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020872
(v2.0)
Taf13NM_02544499730
13.403635.637960.898990.7051128.30728.91987.4280150.852589.859430.5938
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020274
(v1.0)
Taf1399730
MGA0.95065
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020872
(v2.0)
Taf1399730
584/3970.0439465/3970.1116195/3972.5393763/3972.2666140/3970.5493808/3970.4249
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020872
(v2.0)
Taf1399730
257/1650.1258209/1650.2236158/1653.4452577/1653.118141/1650.0478241/165-0.0525
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020872
(v2.0)
Taf1399730
42.789413032.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020872
(v2.0)
Taf1399730
10.37017813.3
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020274
(v1.0)
Taf13NM_02544499730
37.020441.834567.468788.84535.29964
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020274
(v1.0)
Taf13NM_02544499730
10.021210.019719.518126.45841.60914
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
38.70824.9018245.6424
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
37.78341.414537.6017
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
10.17910.9625
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
38.73074.8346841.2402
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
62.465585.783762.0134
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
26.172617.6184
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020274
(v1.0)
Taf13NM_02544499730
51.846672.5261
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020274
(v1.0)
Taf13NM_02544499730
86.6233115.989
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020274
(v1.0)
1078C0176F03-3Mm.244311810004N01Rik99730
U012590NAP095329-001TC905000,TC904999U,F,23.80823.82813.2983.53483.44943.37713.2432
0020274
(v1.0)
18401L0205G08-3Mm.244311810004N01Rik99730
NAP024411-0012.89072.85272.82213.03073.24293.11713.0645
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020274
(v1.0)
1448707_atMm.24431Taf13NM_025444.299730
1099.4752465.8251040.8751759.925604.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020274
(v1.0)
A_51_P120608Taf13NM_02544499730
11P0.4650.0826P
Proteome N/A