DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020283
GeneTaf4b
Synonyms105kDa
Taf2c2
TAFII105
Desc.TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_001100449 chr18:14941754-15058868(+)
DB links


Entrez 72504
MGI 2152345
Ensembl ENSMUSG00000054321
Featureprotein-coding
GO(BP)
  •   2 Terms
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020881
(v2.0)
Taf4bNM_00110044972504
0.6452438.1641217.0823108.33379.29363.285182.1700512.113463.49973.49126
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020283
(v1.0)
Taf4b72504
2-Cell Transient0.95756
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020881
(v2.0)
Taf4b72504
595/3610.2075446/3610.1884144/3612.2374298/3611.0494159/3610.8673798/3610.5438
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020881
(v2.0)
Taf4b72504
313/1510.5358171/1510.0628140/1513.3907271/1512.156537/1510.0281185/151-0.3041
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020881
(v2.0)
Taf4b72504
34.03419236.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020881
(v2.0)
Taf4b72504
10.38136715.49
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
8.4840511.770580.654354.86161.54714
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
37.858528.0031229.738183.3823.48945
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
8.870850.23597212.8419
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
8.6588311.65248.94462
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
147.217109.291
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
8.876010.232749.81016
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
74.673352.97143.7549
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
181.408141.578
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020283
(v1.0)
Taf4bNM_00110044972504
2.2478842.0634
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020283
(v1.0)
Taf4bNM_00110044972504
2.836282.77399
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020283
(v1.0)
1435302_atMm.312233Taf4bNM_001100449.172504
455.1486.71264.11016.175595.5
0020283
(v1.0)
1431193_atMm.312233Taf4bNM_001100449.172504
00280.0500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020283
(v1.0)
A_51_P248293Taf4bXM_12890572504
11P1.3420.293P
Proteome N/A