DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020288
GeneTaf7
Synonyms55kDa
Taf2f
TAFII55
Desc.TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_175770 chr18:37800145-37803858(-)
DB links


Entrez 24074
MGI 1346348
Ensembl ENSMUSG00000051316
Vega OTTMUSG00000034268
Featureprotein-coding
GO(BP)
  •   12 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      DNA-dependent transcription, initiation (GO:0006352)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      transcription initiation from RNA polymerase II promoter (GO:0006367)
      negative regulation of protein kinase activity (GO:0006469)
      intracellular estrogen receptor signaling pathway (GO:0030520)
      negative regulation of histone acetylation (GO:0035067)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020886
(v2.0)
Taf7NM_17577024074
1.0941266.50594.4959102.49866.08272.39772.0497758.21267.033473.7772
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020288
(v1.0)
Taf724074
Major ZGA0.99364
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020886
(v2.0)
Taf724074
697/3830.3502515/3830.3103669/3834.36292535/3834.049186/3831.00791070/3830.8811
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020886
(v2.0)
Taf724074
354/1940.3533251/1940.2542643/1945.24452095/1944.746247/1940.0122236/194-0.3148
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020886
(v2.0)
Taf724074
43.315612933.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020886
(v2.0)
Taf724074
18.85019919.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020288
(v1.0)
Taf7NM_17577024074
69.090265.358376.334145.77791.4292
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020288
(v1.0)
Taf7NM_17577024074
82.449470.519585.252552.36661.61475
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
72.24020.40012971.3074
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
70.513564.702143.1642
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
71.612648.31
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
72.28210.39464947.3411
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
70.673544.200446.4264
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
51.801454.3377
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020288
(v1.0)
Taf7NM_17577024074
56.116979.3304
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020288
(v1.0)
Taf7NM_17577024074
30.738740.2957
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020288
(v1.0)
14353J0451D01-3Mm.12001Taf724074
U038350NAP095417-001Taf7;TC915187Q9R1C0U,F,23.68533.69233.08433.40343.45993.39913.4698
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020288
(v1.0)
1423169_atMm.236009Taf7NM_175770.424074
117.45239.575143.482.32563.1
0020288
(v1.0)
1441982_atMm.236009Taf7NM_175770.424074
88.975112.350093.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020288
(v1.0)
A_52_P577072Taf7NM_01190124074
11P0.4790.0868P
0020288
(v1.0)
A_52_P83959Taf7NM_01190124074
11P0.460.0876P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020288
(v1.0)
Taf724074
031031