DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020394
GeneTbca
Synonymsco-chaperonin associated with a- & b-tubulin
cofactor A
Desc.tubulin cofactor A
LocusNM_009321 chr13:95558898-95612854(+)
DB links


Entrez 21371
MGI 107549
Ensembl ENSMUSG00000042043
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020997
(v2.0)
TbcaNM_00932121371
144.4262.961154.801318.032616.7933109.861113.41939.307220.9207134.961
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020394
(v1.0)
Tbca21371
Maternal RNA0.99723
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020997
(v2.0)
Tbca21371
642/4480.0062470/448-0.0469102/4481.4417239/4480.4227190/4480.81451132/4480.7367
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2020997
(v2.0)
Tbca21371
317/1800.3022186/180-0.068592/1802.5543186/1801.366358/1800.4156372/1800.4458
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020997
(v2.0)
Tbca21371
64.095410262.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2020997
(v2.0)
Tbca21371
22.265838.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020394
(v1.0)
TbcaNM_00932121371
65.416437.605113.413611.626480.8332
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020394
(v1.0)
TbcaNM_00932121371
16.34448.488364.471453.3171523.624
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
68.398952.815841.028
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
66.764137.227529.0458
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
8.621869.45
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
68.438652.092431.8565
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
12.418911.225814.4143
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
3.281624.26182
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020394
(v1.0)
TbcaNM_00932121371
45.602249.173
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020394
(v1.0)
TbcaNM_00932121371
34.131960.381
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020394
(v1.0)
10706H3102D11-3Mm.1863Tbca21371
U015129NAP039063-1TC925716,TC925714P48428U,F2.87613.19373.05142.79642.70062.782.8583
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020394
(v1.0)
1417652_a_atMm.379025TbcaNM_009321.221371
1339.225787.4355.125396.351236.65
0020394
(v1.0)
1437907_a_atMm.379025TbcaNM_009321.221371
792.6473.2336.825349.475699.925
0020394
(v1.0)
1434588_x_atMm.379025TbcaNM_009321.221371
90.950081.82581.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020394
(v1.0)
A_51_P489966TbcaNM_00932121371
11P0.3030.0531P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020394
(v1.0)
Tbca21371
9159145427