DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020408
GeneTbp
SynonymsGtf2d
Desc.TATA box binding protein
LocusNM_013684 chr17:15636852-15654391(+)
DB links


Entrez 21374
MGI 101838
Ensembl ENSMUSG00000014767
Vega OTTMUSG00000030550
Featureprotein-coding
GO(BP)
  •   6 Terms
      transcription, DNA-dependent (GO:0006351)
      DNA-dependent transcription, initiation (GO:0006352)
      regulation of transcription, DNA-dependent (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      transcription from RNA polymerase III promoter (GO:0006383)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
  •   7 Terms
      RNA polymerase II repressing transcription factor binding (GO:0001103)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      transcription regulatory region DNA binding (GO:0044212)
      repressing transcription factor binding (GO:0070491)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021011
(v2.0)
TbpNM_01368421374
8.1522863.683964.71573.349751.429715.502118.487760.362541.157619.8731
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020408
(v1.0)
Tbp21374
Major ZGA0.9632
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021011
(v2.0)
Tbp21374
773/4320.3259550/4320.2317249/4322.772817/4322.2447/432-3.7109106/432-2.6092
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021011
(v2.0)
Tbp21374
410/2020.5063265/2020.2742224/2023.6725704/2023.11672/202-4.044954/202-2.4699
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021011
(v2.0)
Tbp21374
49.253318127.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021011
(v2.0)
Tbp21374
10.77071248.69
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020408
(v1.0)
TbpNM_01368421374
66.189544.756954.620335.613413.0635
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020408
(v1.0)
TbpNM_01368421374
159.619114.055107.33793.7624.7134
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020408
(v1.0)
TbpNM_01368421374
69.20722.9813748.8308
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020408
(v1.0)
TbpNM_01368421374
67.553144.307544.7637
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020408
(v1.0)
TbpNM_01368421374
204.454196.458
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020408
(v1.0)
TbpNM_01368421374
69.24742.9405449.0953
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020408
(v1.0)
TbpNM_01368421374
50.569934.386228.4857
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020408
(v1.0)
TbpNM_01368421374
123.24370.8313
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020408
(v1.0)
TbpNM_01368421374
59.065339.8195
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020408
(v1.0)
TbpNM_01368421374
25.47924.0195
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020408
(v1.0)
9055H3075H08-3Mm.43711Tbp21374
U017529NAP003111-001Tbp;TC876450,TC876449,TC859604P29037U,F,23.24213.3463.58353.53733.26893.20613.2004
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020408
(v1.0)
1426469_a_atMm.244820TbpNM_013684.321374
380.975340.175343.875181.85109.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020408
(v1.0)
A_51_P461828TbpNM_01368421374
1 (0.662 to 1.21)1P0.732 (0.658 to 0.813)0.0286P
0020408
(v1.0)
A_51_P461836TbpNM_01368421374
11P0.8570.375P
Proteome N/A