DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020412
GeneTbrg1
SynonymsTB-5
Desc.transforming growth factor beta regulated gene 1
LocusNM_025289 chr9:37456767-37464897(-)
DB links


Entrez 21376
MGI 1100877
Ensembl ENSMUSG00000011114
Vega OTTMUSG00000029970
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021015
(v2.0)
Tbrg1NM_02528921376
54.026947.235219.8419102.981222.292198.54973.65118.8422251.106219.539
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020412
(v1.0)
Tbrg121376
MGA0.9865
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021015
(v2.0)
Tbrg121376
644/4160.1174471/4160.0628134/4161.936367/4161.1457101/4160.0154562/416-0.1649
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021015
(v2.0)
Tbrg121376
275/1490.3691187/1490.2102128/1493.2802334/1492.47620/149-0.8088105/149-1.0933
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021015
(v2.0)
Tbrg121376
72.701713055.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021015
(v2.0)
Tbrg121376
11.46646517.64
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
49.111113.70976.626153.70752.4283
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
121.93922.7782146.199322.255123.077
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
51.350219.758214.9568
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
50.122913.571314.0123
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
95.9659119.78
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
51.3819.487615.3683
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
70.9437148.41174.152
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
263.03239.834
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020412
(v1.0)
Tbrg1NM_02528921376
3.1737225.7816
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020412
(v1.0)
Tbrg1NM_02528921376
3.304053.68713
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020412
(v1.0)
1452648_atMm.28689Tbrg1NM_025289.321376
186.250280.225599.025784.525
Agilent44K N/A
Proteome N/A