DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020446
GeneTcerg1
Synonymsca150
Fbp28
p144
Taf2s
Desc.transcription elongation regulator 1 (CA150)
LocusNM_001039474 chr18:42671141-42735439(+)
DB links


Entrez 56070
MGI 1926421
Ensembl ENSMUSG00000024498
Vega OTTMUSG00000037173
Featureprotein-coding
GO(BP)
  •   3 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
GO(MF)
  •   4 Terms
      RNA polymerase II repressing transcription factor binding (GO:0001103)
      RNA polymerase II transcription corepressor activity (GO:0001106)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      proline-rich region binding (GO:0070064)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021052
(v2.0)
Tcerg1NM_001039474,NM_001289526,NR_11034456070
6.473146.193779.60369.9953410.28317.19967.1548311.268211.716116.2127
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020446
(v1.0)
Tcerg156070
MGA0.97902
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021052
(v2.0)
Tcerg156070
634/3860.2026410/386-0.0291123/3861.9182269/3860.806378/386-0.2464544/386-0.1041
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021052
(v2.0)
Tcerg156070
293/1340.6121193/1340.4075121/1343.3407245/1342.180910/134-1.59384/134-1.2581
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021052
(v2.0)
Tcerg156070
49.128512140.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021052
(v2.0)
Tcerg156070
11.83658214.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
6.435566.62667.437347.101554.97303
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
25.087628.311370.103857.954141.9156
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
6.728972.367297.22976
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
6.568146.560068.33449
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
135.732116.333
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
6.732882.334879.14099
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
6.885826.856838.06482
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
73.569571.8816
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020446
(v1.0)
Tcerg1NM_00103947456070
26.572718.666
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020446
(v1.0)
Tcerg1NM_00103947456070
9.6074314.8844
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020446
(v1.0)
10545H3099A12-3Mm.17602U043672NAP034117-1Tcerg1;TC911639Q9R0R5U,F,22.00382.2032.24491.94052.36672.06992.4813
0020446
(v1.0)
18367L0204A04-3Mm.67998Tcerg156070
U043672NAP099315-001Tcerg1;TC941573,TC821448Q9R0R5U,F,23.62773.50943.56473.59894.08883.79474.0415
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020446
(v1.0)
1421033_a_atMm.270511Tcerg1NM_001039474.156070
53.175102.125185.675125.95104.1
0020446
(v1.0)
1434434_s_atMm.270511Tcerg1NM_001039474.156070
389519.475882.35888.1671.6
Agilent44K N/A
Proteome N/A