DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020498
GeneTdp2
SynonymsD13Ertd656e
Ttrap
Desc.tyrosyl-DNA phosphodiesterase 2
LocusNM_019551 chr13:24923528-24934022(+)
DB links


Entrez 56196
MGI 1860486
Ensembl ENSMUSG00000035958
Vega OTTMUSG00000000605
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021104
(v2.0)
Tdp2NM_01955156196
5.1712625.215111.700664.306768.170442.696719.86317.8829455.662643.0331
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020498
(v1.0)
Tdp256196
Major ZGA0.98567
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021104
(v2.0)
Tdp256196
720/3680.4544446/3680.1607173/3682.4736366/3681.317521/368-2.0226135/368-2.0339
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021104
(v2.0)
Tdp256196
364/1540.7245215/1540.3631165/1543.5999347/1542.48418/154-2.077644/154-2.3672
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021104
(v2.0)
Tdp256196
60.656813644.6
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021104
(v2.0)
Tdp256196
12.88828115.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
26.20058.0400147.886847.22214.0057
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
58.135113.391572.837781.565329.0284
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
27.3951.891188.77183
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
26.74037.959285.83266
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
10.525815.4728
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
27.4111.865286.39706
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
44.335745.594838.5426
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
88.732772.9092
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020498
(v1.0)
Tdp2NM_01955156196
8.6500740.7224
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020498
(v1.0)
Tdp2NM_01955156196
2.831973.56172
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020498
(v1.0)
9703H3085C02-3Mm.19992Ttrap56196
TtrapTC8644982.6842.64652.90532.82343.10652.71872.8056
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020498
(v1.0)
1448706_atMm.427162Tdp2NM_019551.256196
538.825217.95328.15215.9249.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020498
(v1.0)
A_51_P169047TtrapNM_01955156196
11P0.3660.0705P
0020498
(v1.0)
A_52_P56768TtrapNM_01955156196
11P0.2830.0618P
Proteome N/A