DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020584
GeneTfap2c
SynonymsAp-2.2
AP2gamma
Stra2
Tcfap2c
Desc.transcription factor AP-2, gamma
LocusNM_009335 chr2:172375093-172384121(+)
NM_001159696 chr2:172376491-172384121(+)
DB links


Entrez 21420
MGI 106032
Ensembl ENSMUSG00000028640
Vega OTTMUSG00000016248
Featureprotein-coding
GO(BP)
  •   18 Terms
      trophectodermal cell differentiation (GO:0001829)
      hair follicle development (GO:0001942)
      keratinocyte development (GO:0003334)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      stem cell maintenance (GO:0019827)
      forebrain neuron fate commitment (GO:0021877)
      cerebral cortex development (GO:0021987)
      cell differentiation (GO:0030154)
      germ-line stem cell maintenance (GO:0030718)
      somatic stem cell maintenance (GO:0035019)
      skin development (GO:0043588)
      regulation of epidermis development (GO:0045682)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      sebaceous gland development (GO:0048733)
      dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (GO:0060598)
      epithelial cell proliferation involved in mammary gland duct elongation (GO:0060750)
GO(MF)
  •   9 Terms
      RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977)
      RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980)
      sequence-specific DNA binding RNA polymerase II transcription factor activity (GO:0000981)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      protein dimerization activity (GO:0046983)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021194
(v2.0)
Tfap2cNM_001159696,NM_00933521420
1.4765414.764624.990242.522873.676521.87380.073799929.213670.48513.8339
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020584
(v1.0)
Tcfap2c21420
MGA0.98212
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021194
(v2.0)
Tfap2c21420
1066/4710.6645639/4710.3233149/4711.91361433/4712.9298845/4712.893573/4712.3215
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021194
(v2.0)
Tfap2c21420
510/1900.9081307/1900.5735107/1902.6968836/1903.4515409/1903.13611561/1902.4329
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
15.348917.292631.627751.12650.0518316
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
17.552917.887839.665158.45170.0203044
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
16.04870.53998418.8666
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
15.665117.11921.6239
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
19.019337.9105
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
16.0580.53258923.7164
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
29.282449.364748.7824
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
57.502758.4007
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
13.78116.69331
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020584
(v1.0)
Tcfap2cNM_001159696,NM_00933521420
10.162818.5408
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020584
(v1.0)
856C0152H01-3Mm.3629Tcfap2c21420
U002903NAP097575-001Tcfap2c;TC800304,TC800303,TC800302Q61312U,F,22.98593.07643.48413.28672.98193.17522.9819
0020584
(v1.0)
6001H3014E10-3Mm.3629Tcfap2c21420
U002903NAP097575-001Tcfap2c;TC800302Q61312U,F,23.55253.20713.02613.30123.61373.43283.5041
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020584
(v1.0)
1436392_s_atMm.3629Tcfap2cNM_009335.2,NM_001159696.121420
156.625245.8274.85854.05439.5
0020584
(v1.0)
1418147_atMm.3629Tcfap2cNM_009335.2,NM_001159696.121420
000244.775161.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020584
(v1.0)
A_51_P418820Tcfap2cNM_00933521420
11P0.8180.294P
Proteome N/A