DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0020601
GeneTfip11
SynonymsTip39
Desc.tuftelin interacting protein 11
LocusNM_018783 chr5:112755389-112767093(+)
DB links


Entrez 54723
MGI 1930075
Ensembl ENSMUSG00000029345
Vega OTTMUSG00000023449
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021211
(v2.0)
Tfip11NM_01878354723
14.216820.344414.402438.488242.07529.5959120.065321.879235.53969.56863
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0020601
(v1.0)
Tfip1154723
Major ZGA0.9832
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021211
(v2.0)
Tfip1154723
799/567-0.0179405/567-0.6003247/5672.3775675/5671.578628/567-2.242254/567-1.7518
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2021211
(v2.0)
Tfip1154723
386/2250.2648203/225-0.2634233/2253.5819571/2252.66135/225-3.197566/225-2.3424
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021211
(v2.0)
Tfip1154723
101.698218654.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2021211
(v2.0)
Tfip1154723
32.128811328.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
21.151410.004428.635929.134614.1599
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
25.637613.579258.310864.670334.5085
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
22.11575.1992410.9151
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
21.58719.9039816.2135
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
27.370959.6887
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
22.12855.1280217.7824
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
26.512428.130624.5813
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
57.224344.8809
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0020601
(v1.0)
Tfip11NM_01878354723
4.561773.91607
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0020601
(v1.0)
Tfip11NM_01878354723
0.3128580.225996
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020601
(v1.0)
11447H3115F04-3Mm.172947Tfip1154723
U006003NAP006578-001Tfip11;TC909631Q9ERA63.10523.13443.51023.80523.35183.5693.4351
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0020601
(v1.0)
1448976_atMm.485044Tfip11NM_018783.454723
120.225000122.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0020601
(v1.0)
A_51_P502348Tfip11NM_01878354723
11P0.3050.0775P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0020601
(v1.0)
Tfip1154723
010020